RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 Q6ZN92 141 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 RBKSQ9H477 322 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 A0A0G2JMM0 328 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 A0A1W2PPB8 328 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 A0A1W2PRS3 328 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 KIR3DP1A8MWS1 328 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 DEDDO75618 318 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 IGF2P01344 180 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 APCDD1LQ8NCL9 501 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 KIR2DL2P43627 348 aaPredicted RBP11.68□□□□□ -0.54
GPC6-201ENST00000377047 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
GPC6-201ENST00000377047 GCM2O75603 506 aaPredicted RBP11.68□□□□□ -0.54
GPC6-201ENST00000377047 CCKARP32238 428 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM209AQ5JX71 171 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 RHOVQ96L33 236 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 OPN4Q9UHM6 478 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 DSPPQ9NZW4 1301 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A10PA6NDY2 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A18PA6NE21 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A16PA6NEW6 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A20PA6NIJ5 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A8PA6NJQ4 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A7PA6NKC0 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A22PA8MWA6 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A12PA8MX19 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A5PA8MXJ8 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A23PA8MXZ1 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A15PP0C7V4 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A13PP0C7W8 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A14PP0C7W9 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 FAM90A24PP0C7X0 464 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 LINC00869P0C866 280 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 MFAP4P55083 255 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 HERVK_113P61574 105 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 BSPH1Q075Z2 132 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 TWIST1Q15672 202 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 IQCJQ1A5X6 159 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 OR4B1Q8NGF8 309 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 DUX5Q96PT3 197 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 IGHMP01871 453 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 RCC1P18754 421 aaPredicted RBP11.68□□□□□ -0.54
GPC6-201ENST00000377047 CHRNA10Q9GZZ6 450 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
GPC6-201ENST00000377047 PPOXP50336 477 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 TMEM140Q9NV12 185 aa11.68□□□□□ -0.54
GPC6-201ENST00000377047 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
GPC6-201ENST00000377047 DLK1P80370 383 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 DDB2Q92466 427 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 PGLYRP1O75594 196 aaPredicted RBP11.67□□□□□ -0.54
GPC6-201ENST00000377047 VAX1Q5SQQ9 334 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 ST6GAL2Q96JF0 529 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 CRISP2P16562 243 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 NPBWR2P48146 333 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
GPC6-201ENST00000377047 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 TMEM56-RWDD3S4R434 201 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 ZNF729A6NN14 1252 aaPredicted RBP11.67□□□□□ -0.54
GPC6-201ENST00000377047 ZNF253O75346 499 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 THY1P04216 161 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 CLDN18P56856 261 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 HLA-DRB5Q30154 266 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 SAXO1Q8IYX7 474 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 UBE2L6O14933 153 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 TNFSF10P50591 281 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
GPC6-201ENST00000377047 ZNF880Q6PDB4 577 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 JPT1Q9UK76 154 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 RND2P52198 227 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 LINC00470Q9BZP3 86 aa11.67□□□□□ -0.54
GPC6-201ENST00000377047 BRCA1P38398 1863 aaKnown RBP11.66□□□□□ -0.54
GPC6-201ENST00000377047 PGA5P0DJD9 388 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 PTGDSP41222 190 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
GPC6-201ENST00000377047 OR2A4O95047 310 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 RGP1Q92546 391 aaPredicted RBP11.66□□□□□ -0.54
GPC6-201ENST00000377047 FAM168AQ92567 244 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 TMEM45BQ96B21 275 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 OR2A7Q96R45 310 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
GPC6-201ENST00000377047 TMEM222Q9H0R3 208 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 PLA2G10O15496 165 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 G6PC2Q9NQR9 355 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 TRAV34A0A0B4J273 112 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
GPC6-201ENST00000377047 CECR9P0C854 216 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms