RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 CLDN1O95832 211 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 FAM157CP0CG43 387 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 APOBEC3AP31941 199 aaPredicted RBP13.93□□□□□ -0.18
HLA-A-202ENST00000376806 GPR12P47775 334 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 EFNB3Q15768 340 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 HSD17B10Q99714 261 aaKnown RBP13.93□□□□□ -0.18
HLA-A-202ENST00000376806 SLC25A31Q9H0C2 315 aa13.93□□□□□ -0.18
HLA-A-202ENST00000376806 TRAV38-1A0A0B4J264 116 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 C17orf98A8MV24 154 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 A8MXK9 166 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 CHST1O43916 411 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 OMGP23515 440 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 ZNF816Q0VGE8 651 aaPredicted RBP13.92□□□□□ -0.18
HLA-A-202ENST00000376806 CDSNQ15517 529 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 SPAG16Q8N0X2 631 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 TMEM252Q8N6L7 170 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 OR1S2Q8NGQ3 325 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 LRRC46Q96FV0 321 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 MMP24Q9Y5R2 645 aa13.92□□□□□ -0.18
HLA-A-202ENST00000376806 HCFC1P51610 2035 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 ROS1P08922 2347 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 KBTBD11-OT1A0A1B0GTJ5 212 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 LINC00473A8K010 186 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 B8ZZF3 427 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 TMEM178BH3BS89 294 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 S1PR2O95136 353 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 PLAUP00749 431 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 ZP3P21754 424 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 BRWD1-AS2P59051 145 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 FGFRL1Q8N441 504 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 GFOD1Q9NXC2 390 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 LPAR3Q9UBY5 353 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 B9A039 149 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 SIAH2O43255 324 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 FBXO24O75426 580 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 P0C879 139 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 PAX9P55771 341 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 SWI5Q1ZZU3 235 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 MST1LQ2TV78 715 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 ODF3L1Q8IXM7 274 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 ZNF295-AS1Q8N0V1 137 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 GINS3Q9BRX5 216 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 IFI27L2Q9H2X8 130 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 MS4A5Q9H3V2 200 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 TMEM106BQ9NUM4 274 aa13.91□□□□□ -0.18
HLA-A-202ENST00000376806 PKDREJQ9NTG1 2253 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 PPIAL4EA0A075B759 164 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 ZNF729A6NN14 1252 aaPredicted RBP13.9□□□□□ -0.18
HLA-A-202ENST00000376806 ZNF705EA8MWA4 302 aaPredicted RBP13.9□□□□□ -0.18
HLA-A-202ENST00000376806 PPIAL4DF5H284 164 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 TMPRSS2O15393 492 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 CLDN14O95500 239 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 PPIAL4FP0DN26 164 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 SULT1A2P50226 295 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 BAXQ07812 192 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 CCDC28AQ8IWP9 274 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 CA5BP1Q8WTZ4 195 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 LINC00052Q96N35 136 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 RAB40CQ96S21 281 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 COA4Q9NYJ1 87 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 PPIAL4AQ9Y536 164 aa13.9□□□□□ -0.18
HLA-A-202ENST00000376806 YLPM1P49750 1951 aaKnown RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 C1QL1O75973 258 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 ATG12O94817 140 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 G6PCP35575 357 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 CCL17Q92583 94 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 CORO2AQ92828 525 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 ABHD14AQ9BUJ0 271 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 TAS2R3Q9NYW6 316 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 SLC31A2O15432 143 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 SYNGR2O43760 224 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 PROP1O75360 226 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 IGHV3-7P01780 117 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 NDUFB7P17568 137 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 DUTP33316 252 aaKnown RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 RAB7AP51149 207 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 ZNF134P52741 427 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 LINC00205P59089 165 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 RPL23AP62750 156 aaKnown RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 CLINT1Q14677 625 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 UTF1Q5T230 341 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 SAT2Q96F10 170 aaPredicted RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 SMIM8Q96KF7 97 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 LINC00574Q9H8X3 128 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 KCNJ16Q9NPI9 418 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 IDI2-AS1Q9NZ38 188 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 CISD1Q9NZ45 108 aaKnown RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 PLA2G2EQ9NZK7 142 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 SLC25A10Q9UBX3 287 aaPredicted RBP13.89□□□□□ -0.19
HLA-A-202ENST00000376806 LAMP3Q9UQV4 416 aa13.89□□□□□ -0.19
HLA-A-202ENST00000376806 FAM90A26D6RGX4 464 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 M0R1X1 148 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 TOR1AO14656 332 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 SHOXO15266 292 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 MED6O75586 246 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 KRASP01116 189 aa13.88□□□□□ -0.19
HLA-A-202ENST00000376806 TMEM30BQ3MIR4 351 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms