RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TNCP24821 2201 aa11.48□□□□□ -0.57
CLCN6-204ENST00000376491 TRBV6-6A0A0A6YYG2 114 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 H7C2Y5 167 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 SLC22A1O15245 554 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 RBBP9O75884 186 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 CA2P00918 260 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 TPPP2P59282 170 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 PITPNAQ00169 270 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 PSG5Q15238 335 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 SRSF7Q16629 238 aaKnown RBP eCLIP11.47□□□□□ -0.574e-7■■■■□ 26.7
CLCN6-204ENST00000376491 RBM48Q5RL73 367 aaKnown RBP11.47□□□□□ -0.57
CLCN6-204ENST00000376491 PYHIN1Q6K0P9 492 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 ZNF562Q6V9R5 426 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 C8orf59Q8N0T1 100 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-204ENST00000376491 Q8N1Y9 231 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 DRAXINQ8NBI3 349 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-204ENST00000376491 KCNG3Q8TAE7 436 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 PHYHIPQ92561 330 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 FLYWCH2Q96CP2 140 aaKnown RBP11.47□□□□□ -0.57
CLCN6-204ENST00000376491 RNF5Q99942 180 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-204ENST00000376491 PLEKHJ1Q9NW61 149 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
CLCN6-204ENST00000376491 STARD9Q9P2P6 4700 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 SOCS1O15524 211 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 IGKV1-16P04430 117 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 SCTP09683 121 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 SRMP19623 302 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 CEACAM6P40199 344 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 MOB1BQ7L9L4 216 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 ZNF383Q8NA42 475 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 OR4C12Q96R67 309 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 TMED9Q9BVK6 235 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 ZMAT4Q9H898 229 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 C8orf4Q9NR00 106 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 AK3Q9UIJ7 227 aa11.46□□□□□ -0.57
CLCN6-204ENST00000376491 FOXI3A8MTJ6 420 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-204ENST00000376491 ARPC1BO15143 372 aaKnown RBP11.45□□□□□ -0.58
CLCN6-204ENST00000376491 TRGV3P03979 118 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 IGHV4-30-4P0DP06 118 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 LYL1P12980 280 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 HLA-DRB3P79483 266 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 SSBP2P81877 361 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-204ENST00000376491 CITED4Q96RK1 184 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 GFI1Q99684 422 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 SLA2Q9H6Q3 261 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 C19orf73Q9NVV2 129 aa11.45□□□□□ -0.58
CLCN6-204ENST00000376491 IGKV1-6A0A0C4DH72 117 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 BPNT1O95861 308 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 TFAP2AP05549 437 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 CDK1P06493 297 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 CPEP16870 476 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 ZBTB25P24278 435 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 TMEM50BP56557 158 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 FXYD3Q14802 87 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 RNLSQ5VYX0 342 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 CEACAM19Q7Z692 300 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 FAM89BQ8N5H3 189 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 PTX4Q96A99 478 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-204ENST00000376491 Q9N2K0 584 aa11.44□□□□□ -0.58
CLCN6-204ENST00000376491 LSM2Q9Y333 95 aaKnown RBP11.44□□□□□ -0.58
CLCN6-204ENST00000376491 A8MZ25 164 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 EBAG9O00559 213 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 HSPA12AO43301 675 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 SLC25A17O43808 307 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 SPDEFO95238 335 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 UCHL1P09936 223 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 RPS16P62249 146 aaKnown RBP11.43□□□□□ -0.58
CLCN6-204ENST00000376491 P2RY14Q15391 338 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 PDPNQ86YL7 162 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 POC5Q8NA72 575 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 OR6M1Q8NGM8 313 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 GRPEL2Q8TAA5 225 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 TSNAXQ99598 290 aaKnown RBP11.43□□□□□ -0.58
CLCN6-204ENST00000376491 ELOVL1Q9BW60 279 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 STUB1Q9UNE7 303 aa11.43□□□□□ -0.58
CLCN6-204ENST00000376491 LCE6AA0A183 80 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 LDLRAD4O15165 306 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 CD40LGP29965 261 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 RCN1Q15293 331 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 SPHARQ15513 63 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 IL34Q6ZMJ4 242 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 ARHGAP5-AS1Q96IT6 56 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 URM1Q9BTM9 101 aaKnown RBP11.42□□□□□ -0.58
CLCN6-204ENST00000376491 RSRP1Q9BUV0 290 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 RANGRFQ9HD47 186 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-204ENST00000376491 ZNF355PQ9NSJ1 428 aa11.42□□□□□ -0.58
CLCN6-204ENST00000376491 ZNF221Q9UK13 617 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms