RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SLC22A18ASQ8N1D0 253 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 FADS6Q8N9I5 356 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 ZNF56Q15929 161 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 TRPM6Q9BX84 2022 aa11.84□□□□□ -0.51
COL4A1-201ENST00000375820 AHDC1Q5TGY3 1603 aaPredicted RBP11.84□□□□□ -0.51
COL4A1-201ENST00000375820 SF3B6Q9Y3B4 125 aaKnown RBP11.84□□□□□ -0.51
COL4A1-201ENST00000375820 ZNF645Q8N7E2 425 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 IGHV1-45A0A0A0MS14 117 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 BCL2P10415 239 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 UNC119Q13432 240 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 CEACAM21Q3KPI0 293 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 A1L4Q6 167 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 SOD3P08294 240 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 COL5A1-AS1Q5SY13 56 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 ANOS1P23352 680 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 ISXQ2M1V0 245 aa11.83□□□□□ -0.52
COL4A1-201ENST00000375820 NFAM1Q8NET5 270 aaPredicted RBP11.83□□□□□ -0.52
COL4A1-201ENST00000375820 SRSF12Q8WXF0 261 aaKnown RBP11.83□□□□□ -0.52
COL4A1-201ENST00000375820 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 ST6GALNAC3Q8NDV1 305 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 TNFSF18Q9UNG2 199 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 PRB3Q04118 309 aaPredicted RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 ZNF385CQ66K41 422 aaPredicted RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 LSM10Q969L4 123 aaKnown RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 C9JCJ5 164 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 CDS2O95674 445 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 CTSBP07858 339 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 STPG1Q5TH74 334 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 OR4C13Q8NGP0 309 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 LINC00596Q86U02 117 aa11.82□□□□□ -0.52
COL4A1-201ENST00000375820 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
COL4A1-201ENST00000375820 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 A0A1W2PQF6 199 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 ZG16O60844 167 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 TGFAP01135 160 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 GPX1P07203 203 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 CDCP2Q5VXM1 449 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 PARLQ9H300 379 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 PLP1P60201 277 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 SCNM1Q9BWG6 230 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 CALYQ9NYX4 217 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 H0YL77 283 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 MPV17P39210 176 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 WFDC6Q9BQY6 131 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 C17orf51A8MQB3 221 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 MOSP00540 346 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 EGR1P18146 543 aa11.81□□□□□ -0.52
COL4A1-201ENST00000375820 ZNF658BQ4V348 819 aaPredicted RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 DUSP15Q9H1R2 295 aaPredicted RBP11.81□□□□□ -0.52
COL4A1-201ENST00000375820 DOCK1Q14185 1865 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 ABHD12Q8N2K0 398 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 SMRP1Q8NCR6 262 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 GPR82Q96P67 336 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 CCL27Q9Y4X3 112 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 A0A1W2PRX2 142 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 FAM74A7A6NL05 159 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 DLL1O00548 723 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 MPDU1O75352 247 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 FAM214BQ7L5A3 538 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 CENPVQ7Z7K6 275 aaPredicted RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 LINC01560Q8TB33 94 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 ZNFX1Q9P2E3 1918 aaKnown RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 RP1L1Q8IWN7 2480 aaPredicted RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 CRYBB3P26998 211 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 COLQQ9Y215 455 aaPredicted RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 A8MWL6 223 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 M0QZK8 103 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms