RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 C8orf31Q8N9H6 132 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 SNAPC3Q92966 411 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 DIRAS2Q96HU8 199 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 AKR1E2Q96JD6 320 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
LSM2-208ENST00000375661 RYR3Q15413 4870 aa9.67□□□□□ -0.86
LSM2-208ENST00000375661 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 CEACAM6P40199 344 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 CBX5P45973 191 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 DIAPH2-AS1Q14236 149 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 BEST4Q8NFU0 473 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 SCPEP1Q9HB40 452 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 BATF3Q9NR55 127 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 DPM3Q9P2X0 92 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
LSM2-208ENST00000375661 SLC23A1Q9UHI7 598 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
LSM2-208ENST00000375661 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 SULT1C2O00338 296 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 BET1O15155 118 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 RGS11O94810 467 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 DIRAS3O95661 229 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 LPLP06858 475 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 NHLRC4P0CG21 123 aaPredicted RBP9.65□□□□□ -0.86
LSM2-208ENST00000375661 NAT1P18440 290 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 ZBTB25P24278 435 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 CNPY1Q3B7I2 92 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 TCTEX1D4Q5JR98 221 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 OR6Q1Q8NGQ2 317 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 OR10X1Q8NGY0 326 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 C11orf54Q9H0W9 315 aaPredicted RBP9.65□□□□□ -0.86
LSM2-208ENST00000375661 RDH8Q9NYR8 311 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 HILPDAQ9Y5L2 63 aa9.65□□□□□ -0.86
LSM2-208ENST00000375661 TENM3Q9P273 2699 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 ST8SIA5O15466 376 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 HSPA12AO43301 675 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 DGCR2P98153 550 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 RNASE12Q5GAN4 147 aaKnown RBP9.64□□□□□ -0.87
LSM2-208ENST00000375661 PYHIN1Q6K0P9 492 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 LYSMD2Q8IV50 215 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 OR2AK2Q8NG84 335 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 OR52I2Q8NH67 350 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 ST6GALNAC6Q969X2 333 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 CREB3L1Q96BA8 519 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 AGMATQ9BSE5 352 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 MCRIP2Q9BUT9 160 aaKnown RBP9.64□□□□□ -0.87
LSM2-208ENST00000375661 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 IFT46Q9NQC8 304 aa9.64□□□□□ -0.87
LSM2-208ENST00000375661 AMMECR1Q9Y4X0 333 aaPredicted RBP9.64□□□□□ -0.87
LSM2-208ENST00000375661 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 CTDSPLO15194 276 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 CTXN2P0C2S0 81 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 BRS3P32247 399 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 S100A5P33763 92 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 ZNF137PP52743 207 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 IL18Q14116 193 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 H1FOOQ8IZA3 346 aaPredicted RBP9.63□□□□□ -0.87
LSM2-208ENST00000375661 OR10J5Q8NHC4 309 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 C15orf40Q8WUR7 153 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 CAPSLQ8WWF8 208 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 RABL2AQ9UBK7 228 aaPredicted RBP9.63□□□□□ -0.87
LSM2-208ENST00000375661 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 MTFP1Q9UDX5 166 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 RABL2BQ9UNT1 228 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 V9GYH0 126 aa9.63□□□□□ -0.87
LSM2-208ENST00000375661 A0A1W2PPI3 338 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 HSD17B6O14756 317 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 PROP1O75360 226 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 NFYAP23511 347 aaPredicted RBP9.62□□□□□ -0.87
LSM2-208ENST00000375661 HLA-DMAP28067 261 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 SLC6A1P30531 599 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 HOXD3P31249 432 aaPredicted RBP9.62□□□□□ -0.87
LSM2-208ENST00000375661 RCVRNP35243 200 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 CEACAM3P40198 252 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 OR3A3P47888 321 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 REG1BP48304 166 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 ARPC4P59998 168 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 ZNF816Q0VGE8 651 aaPredicted RBP9.62□□□□□ -0.87
LSM2-208ENST00000375661 FAM131AQ6UXB0 335 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 OR5AP2Q8NGF4 316 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 EDARADDQ8WWZ3 215 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 RPEQ96AT9 228 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 ABHD14BQ96IU4 210 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 ZNF251Q9BRH9 671 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 GINS4Q9BRT9 223 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 RNF150Q9ULK6 438 aa9.62□□□□□ -0.87
LSM2-208ENST00000375661 SAA2-SAA4A0A096LPE2 208 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms