RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 C10orf111Q8N326 155 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
TRAF1-201ENST00000373887 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 IGHV3OR16-10A0A075B7F0 116 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 RPL36A-HNRNPH2H7BZ11 118 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 PITX3O75364 302 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 HBZP02008 142 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 DLX6P56179 175 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 SURF2Q15527 256 aaPredicted RBP12.4□□□□□ -0.42
TRAF1-201ENST00000373887 STXBP6Q8NFX7 210 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 OR4B1Q8NGF8 309 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 PGLYRP3Q96LB9 341 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 BRWD1Q9NSI6 2320 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 A0A1B0GU03 582 aa12.4□□□□□ -0.43
TRAF1-201ENST00000373887 GREM1O60565 184 aa12.4□□□□□ -0.43
TRAF1-201ENST00000373887 NDUFB4O95168 129 aa12.4□□□□□ -0.43
TRAF1-201ENST00000373887 KLF9Q13886 244 aaPredicted RBP12.4□□□□□ -0.43
TRAF1-201ENST00000373887 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.43
TRAF1-201ENST00000373887 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
TRAF1-201ENST00000373887 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 CTDSPLO15194 276 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 TEX30Q5JUR7 227 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 TMEM105Q8N8V8 129 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 HSPB7Q9UBY9 170 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 IL19Q9UHD0 177 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 CACNG7P62955 275 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
TRAF1-201ENST00000373887 SGK494Q96LW2 274 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 CCL13Q99616 98 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 FXYD3Q14802 87 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 INO80CQ6PI98 192 aaPredicted RBP12.39□□□□□ -0.43
TRAF1-201ENST00000373887 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
TRAF1-201ENST00000373887 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAF1-201ENST00000373887 EFNB2P52799 333 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 PRSS27Q9BQR3 290 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 FGF5P12034 268 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
TRAF1-201ENST00000373887 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 MIA3Q5JRA6 1907 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 SOD3P08294 240 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
TRAF1-201ENST00000373887 J3QT63 122 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 C1QAP02745 245 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 OR4A5Q8NH83 315 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 DDB2Q92466 427 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 OGG1O15527 345 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 MPDU1O75352 247 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 FAM214BQ7L5A3 538 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 FDCSPQ8NFU4 85 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
TRAF1-201ENST00000373887 OPN4Q9UHM6 478 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 TMEM262E9PQX1 116 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 TRGC2P03986 189 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 RPL31P62899 125 aaKnown RBP12.38□□□□□ -0.43
TRAF1-201ENST00000373887 ATOH7Q8N100 152 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 STPG2Q8N412 459 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
TRAF1-201ENST00000373887 COL25A1Q9BXS0 654 aaPredicted RBP12.38□□□□□ -0.43
TRAF1-201ENST00000373887 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
TRAF1-201ENST00000373887 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 LDLRAD4O15165 306 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAF1-201ENST00000373887 KLK2P20151 261 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 CSRP2Q16527 193 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 NUDT16L1Q9BRJ7 211 aaKnown RBP12.37□□□□□ -0.43
TRAF1-201ENST00000373887 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 LTBRP36941 435 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 MMP16P51512 607 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 TSPAN2O60636 221 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 COX6A1P12074 109 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 TMEM136Q6ZRR5 245 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 WNT5BQ9H1J7 359 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 SLC25A53Q5H9E4 307 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 CD300LDQ6UXZ3 194 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 NUDT10Q8NFP7 164 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 NUDT11Q96G61 164 aa12.37□□□□□ -0.43
TRAF1-201ENST00000373887 CX3CL1P78423 397 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 H3BTX0 84 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 PILRAQ9UKJ1 303 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 K7N7A8 449 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 BCL2P10415 239 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 CCL19Q99731 98 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 ZDHHC8Q9ULC8 765 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 A8MWL6 223 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 ANOS1P23352 680 aa12.36□□□□□ -0.43
TRAF1-201ENST00000373887 PRDX2P32119 198 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms