RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ZNF850A8MQ14 1090 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 LINC00587B1AMM8 73 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 OR5AC1P0C628 307 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 GABRR1P24046 479 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 POLR2GP62487 172 aaKnown RBP eCLIP17.07■□□□□ 0.32
SYNC-201ENST00000373484 MZT1Q08AG7 82 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 GNMTQ14749 295 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 ETV3LQ6ZN32 361 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 OR4D5Q8NGN0 318 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 RSRP1Q9BUV0 290 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 AK3Q9UIJ7 227 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 IGHV3-64DA0A0J9YX35 117 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 SCGB1D2O95969 90 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 PRH1P02810 166 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 OR8U8P0C7N1 319 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 MMP9P14780 707 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 GPR6P46095 362 aaPredicted RBP17.06■□□□□ 0.32
SYNC-201ENST00000373484 MTCP1P56278 107 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 RSU1Q15404 277 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 KRBOX4Q5JUW0 171 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 RBMS3Q6XE24 437 aaKnown RBP17.06■□□□□ 0.32
SYNC-201ENST00000373484 TECTBQ96PL2 329 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 SPIN2AQ99865 258 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 SPIN2BQ9BPZ2 258 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 C11orf1Q9H5F2 150 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 ZNF286AQ9HBT8 521 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 SLC2A9Q9NRM0 540 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 TMEM106BQ9NUM4 274 aa17.06■□□□□ 0.32
SYNC-201ENST00000373484 DUXBA0A1W2PPF3 345 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 PPIHO43447 177 aaKnown RBP17.05■□□□□ 0.32
SYNC-201ENST00000373484 GATCO43716 136 aaKnown RBP17.05■□□□□ 0.32
SYNC-201ENST00000373484 FOSL1P15407 271 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 SRSF7Q16629 238 aaKnown RBP eCLIP17.05■□□□□ 0.32
SYNC-201ENST00000373484 SOHLH1Q5JUK2 328 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 PRAMEF6Q5VXH4 476 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 Q6ZS49 121 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 SLC16A13Q7RTY0 426 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 MOGAT3Q86VF5 341 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 ZDHHC23Q8IYP9 409 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 NPRL2Q8WTW4 380 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 DCAF16Q9NXF7 216 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 CXorf65A6NEN9 183 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 IFNL4K9M1U5 179 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 PITX3O75364 302 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 LOXL1Q08397 574 aaPredicted RBP17.05■□□□□ 0.32
SYNC-201ENST00000373484 TMEM42Q69YG0 159 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 HEPN1Q6WQI6 88 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 MAPK1IP1LQ8NDC0 245 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 Q8TCH9 128 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 OR5P3Q8WZ94 311 aa17.05■□□□□ 0.32
SYNC-201ENST00000373484 PIGBOS1A0A0B4J2F0 54 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 SMAD7O15105 426 aaKnown RBP17.04■□□□□ 0.32
SYNC-201ENST00000373484 USF1P22415 310 aaPredicted RBP17.04■□□□□ 0.32
SYNC-201ENST00000373484 DPPA3Q6W0C5 159 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 LYZL2Q7Z4W2 148 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 WDR86Q86TI4 376 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 ZNF565Q8N9K5 539 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 SUMF2Q8NBJ7 301 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 FAAP24Q9BTP7 215 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 RTL8AQ9BWD3 113 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 SLC25A31Q9H0C2 315 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 KIAA1456Q9P272 454 aa17.04■□□□□ 0.32
SYNC-201ENST00000373484 IGHV4-61A0A0C4DH41 118 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 WRBO00258 174 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 HSPA12AO43301 675 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 IGHV2-70P01814 119 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 RBP2P50120 134 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 RND3P61587 244 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 CEACAM21Q3KPI0 293 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 AKIRIN2Q53H80 203 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 TIMD4Q96H15 378 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 CYYR1Q96J86 154 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 HDHD3Q9BSH5 251 aaPredicted RBP17.03■□□□□ 0.32
SYNC-201ENST00000373484 FGF23Q9GZV9 251 aaPredicted RBP17.03■□□□□ 0.32
SYNC-201ENST00000373484 SIRT7Q9NRC8 400 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 UFSP2Q9NUQ7 469 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 WIPI2Q9Y4P8 454 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 A0A1W2PPE3 182 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 TMEM178BH3BS89 294 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 NRASP01111 189 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 GRPP07492 148 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 AKR1C3P42330 323 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 DNLZQ5SXM8 178 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 FAM24BQ8N5W8 94 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 RAB1CQ92928 201 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 GNPNAT1Q96EK6 184 aaPredicted RBP17.03■□□□□ 0.32
SYNC-201ENST00000373484 BSCL2Q96G97 398 aaPredicted RBP17.03■□□□□ 0.32
SYNC-201ENST00000373484 MIOXQ9UGB7 285 aa17.03■□□□□ 0.32
SYNC-201ENST00000373484 FAM90A10PA6NDY2 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A18PA6NE21 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A16PA6NEW6 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A20PA6NIJ5 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A8PA6NJQ4 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A7PA6NKC0 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A22PA8MWA6 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A12PA8MX19 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A5PA8MXJ8 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A23PA8MXZ1 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 OR2C1O95371 312 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms