RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TMEM45BQ96B21 275 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF665Q9H7R5 613 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 COX7A1P24310 79 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 FGF12P61328 243 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 A0A0J9YW62 118 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-202ENST00000373474 P2RY4P51582 365 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
LMX1B-202ENST00000373474 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 NIT1Q86X76 327 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 RARRES2Q99969 163 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 CLN8Q9UBY8 286 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 PPIHO43447 177 aaKnown RBP12.29□□□□□ -0.44
LMX1B-202ENST00000373474 MDKP21741 143 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-202ENST00000373474 NHLRC3Q5JS37 347 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 TMEM222Q9H0R3 208 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 IGKV1D-42A0A075B6H8 117 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 LIPFP07098 398 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 MAS1LP35410 378 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 MEF2CQ06413 473 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-202ENST00000373474 TTTY12Q9BZ98 90 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 PARLQ9H300 379 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 MAP1LC3AQ9H492 121 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 COL10A1Q03692 680 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 LRRC75BQ2VPJ9 315 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 CTHRC1Q96CG8 243 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
LMX1B-202ENST00000373474 TNS1Q9HBL0 1735 aaKnown RBP12.28□□□□□ -0.44
LMX1B-202ENST00000373474 SYNGR1O43759 233 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
LMX1B-202ENST00000373474 H2BFSP57053 126 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 RPS20P60866 119 aaKnown RBP12.28□□□□□ -0.44
LMX1B-202ENST00000373474 OR8I2Q8N0Y5 310 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 A1L4Q6 167 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A10PA6NDY2 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A18PA6NE21 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A16PA6NEW6 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A20PA6NIJ5 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A8PA6NJQ4 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A7PA6NKC0 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A22PA8MWA6 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A12PA8MX19 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A5PA8MXJ8 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A23PA8MXZ1 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 SLC25A17O43808 307 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A15PP0C7V4 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A13PP0C7W8 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A14PP0C7W9 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 FAM90A24PP0C7X0 464 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 CKS2P33552 79 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 MUC15Q8N387 334 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF488Q96MN9 340 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 A0A1W2PP11 408 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 NPIPB6E9PJ23 425 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 HIST1H2BAQ96A08 127 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
LMX1B-202ENST00000373474 PSMG4Q5JS54 123 aa12.27□□□□□ -0.44
LMX1B-202ENST00000373474 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.44
LMX1B-202ENST00000373474 AURKAIP1Q9NWT8 199 aaPredicted RBP12.27□□□□□ -0.44
LMX1B-202ENST00000373474 LHFPL6Q9Y693 200 aa12.27□□□□□ -0.44
LMX1B-202ENST00000373474 NDUFB4O95168 129 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 GLIPR1P48060 266 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 SCARF2Q96GP6 870 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-202ENST00000373474 FOXC1Q12948 553 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 LINC01590Q5TEZ4 76 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 ID1P41134 155 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 IGLV3-21P80748 117 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-202ENST00000373474 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 C1RLQ9NZP8 487 aa12.27□□□□□ -0.45
LMX1B-202ENST00000373474 IGHV3OR15-7A0A075B7D8 119 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 HPRT1P00492 218 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 HOXD4P09016 255 aaPredicted RBP12.26□□□□□ -0.45
LMX1B-202ENST00000373474 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
LMX1B-202ENST00000373474 FOXL2P58012 376 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 RUNX1Q01196 453 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
LMX1B-202ENST00000373474 COA4Q9NYJ1 87 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms