RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CTSSP25774 331 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 ZNF79Q15937 498 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 C12orf54Q6X4T0 127 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 RREB1Q92766 1687 aa9.96□□□□□ -0.81
VCL-202ENST00000372755 GAGE10A6NGK3 116 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 TNFSF10P50591 281 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 OR8G5Q8NG78 346 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 NRIP2Q9BQI9 281 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 KCNK7Q9Y2U2 307 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 LRP5O75197 1615 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 C7orf66A4D0T2 115 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
VCL-202ENST00000372755 SPATA45Q537H7 98 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 PRSS27Q9BQR3 290 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.96□□□□□ -0.82
VCL-202ENST00000372755 STPG1Q5TH74 334 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 MEGF10Q96KG7 1140 aa9.96□□□□□ -0.82
VCL-202ENST00000372755 FCGR2BP31994 310 aaPredicted RBP9.95□□□□□ -0.82
VCL-202ENST00000372755 RND2P52198 227 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 SLC25A53Q5H9E4 307 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 CALYQ9NYX4 217 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 IGKV3D-15A0A087WSY6 115 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 A0A1W2PQF6 199 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 OVCH2Q7RTZ1 564 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 TRBV5-5A0A0J9YX44 114 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 TCF21O43680 179 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 TSPAN2O60636 221 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
VCL-202ENST00000372755 PLAURQ03405 335 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 SLC25A47Q6Q0C1 308 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 LEPROTL1O95214 131 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 SCTP09683 121 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 SSTR5P35346 364 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 GZMMP51124 257 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 SAXO1Q8IYX7 474 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
VCL-202ENST00000372755 RHOVQ96L33 236 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 DOCK2Q92608 1830 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 PRRC2BQ5JSZ5 2229 aaKnown RBP9.95□□□□□ -0.82
VCL-202ENST00000372755 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 TRGC1P0CF51 173 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 VSIG10L2P0DP72 767 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 MUC1P15941 1255 aaPredicted RBP9.95□□□□□ -0.82
VCL-202ENST00000372755 RELQ04864 619 aaPredicted RBP9.95□□□□□ -0.82
VCL-202ENST00000372755 DNAJC4Q9NNZ3 241 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 OR5AC2Q9NZP5 309 aa9.95□□□□□ -0.82
VCL-202ENST00000372755 CGB1A6NKQ9 187 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 DLX6P56179 175 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 C19orf24Q9BVV8 132 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 GPR132Q9UNW8 380 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 FBLL1A6NHQ2 334 aaKnown RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 ISG15P05161 165 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 FTH1P19P0C7X4 201 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 JOSD1Q15040 202 aaPredicted RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 PGLYRP4Q96LB8 373 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 GPR82Q96P67 336 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 JPT1Q9UK76 154 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 PPIAL4CA0A0B4J2A2 164 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 LMX1BO60663 402 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 PPIAL4GP0DN37 164 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 IL11P20809 199 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 CD300CQ08708 224 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 TMEM177Q53S58 311 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 MRAP2Q96G30 205 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 ELF5Q9UKW6 265 aaPredicted RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 ODAMA1E959 279 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 C8orf88P0DMB2 117 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 MIC13Q5XKP0 118 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 TCF24Q7RTU0 167 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
VCL-202ENST00000372755 EEF1AKMT3Q96AZ1 226 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
VCL-202ENST00000372755 TMEM229AB2RXF0 380 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 PLAUP00749 431 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 GPX1P07203 203 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 TIMP4Q99727 224 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 SFXN3Q9BWM7 321 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 GON4LQ3T8J9 2241 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 A0A0B4J293 547 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 PPP1R17O96001 155 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 NAT2P11245 290 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 FGF5P12034 268 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 FGFRL1Q8N441 504 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 TMEM186Q96B77 213 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
VCL-202ENST00000372755 OR51M1Q9H341 326 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 RNF115Q9Y4L5 304 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 EVPLQ92817 2033 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 KCNAB3O43448 404 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 PLP1P60201 277 aa9.93□□□□□ -0.82
VCL-202ENST00000372755 OR9G1Q8NH87 305 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms