RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TMEM250H0YL14 139 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 NUPR1O60356 82 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 CRYAAP02489 173 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 CNN1P51911 297 aaKnown RBP12.51□□□□□ -0.41
COL9A2-202ENST00000372748 RAB4BP61018 213 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 CENPVQ7Z7K6 275 aaPredicted RBP12.51□□□□□ -0.41
COL9A2-202ENST00000372748 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF503-AS2A6NEH8 195 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 RHBDL1O75783 438 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 COX5BP10606 129 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 HOXA6P31267 233 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
COL9A2-202ENST00000372748 CST9LP1Q5W188 147 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 BTNL3Q6UXE8 466 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 FGFRL1Q8N441 504 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 GBGT1Q8N5D6 347 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 OR5P3Q8WZ94 311 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
COL9A2-202ENST00000372748 TECTAO75443 2155 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 DNPH1O43598 174 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 CELA3AP09093 270 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 NPPCP23582 126 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 ARF1P84077 181 aaKnown RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 TFF3Q07654 80 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 ACSF3Q4G176 576 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 COLCA1Q6ZS62 124 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 DLL3Q9NYJ7 618 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 A0A0U1RQK1 487 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF320A2RRD8 509 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 GGCTO75223 188 aaKnown RBP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 KRASP01116 189 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 IL3RAP26951 378 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 CYB561P49447 251 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL9A2-202ENST00000372748 FFAR4Q5NUL3 377 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 HES7Q9BYE0 225 aa12.5□□□□□ -0.41
COL9A2-202ENST00000372748 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 M0R143 59 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 UBE2G2P60604 165 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 ERVFC1-1P60608 527 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 DERL1Q9BUN8 251 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 RAMP3O60896 148 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 MRPL33O75394 65 aaKnown RBP12.49□□□□□ -0.41
COL9A2-202ENST00000372748 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-202ENST00000372748 RIPPLY2Q5TAB7 128 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 CISD2Q8N5K1 135 aaKnown RBP12.49□□□□□ -0.41
COL9A2-202ENST00000372748 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 ANAPC16Q96DE5 110 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 RIMS4Q9H426 269 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-202ENST00000372748 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF705FA8MVS1 300 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 SIRPB1O00241 398 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF705DP0CH99 300 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF705BP0CI00 300 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 GCH1P30793 250 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 CCKARP32238 428 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 MPLP40238 635 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 FAM58AQ8N1B3 248 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 TNRC6BQ9UPQ9 1833 aaKnown RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 CACNA1DQ01668 2161 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 A6NNC1 897 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 G6PCP35575 357 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 DCAF12Q5T6F0 453 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 TMEM14EPQ6UXP3 125 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 NEIL1Q96FI4 390 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 LIN7CQ9NUP9 197 aaKnown RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 IL17BQ9UHF5 180 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 PCSK5Q92824 1860 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 KNTC1P50748 2209 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 GRIFINA4D1Z8 144 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 DEGS1O15121 323 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF816Q0VGE8 651 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 KCNIP4Q6PIL6 250 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 ZNF705AQ6ZN79 300 aaPredicted RBP12.48□□□□□ -0.41
COL9A2-202ENST00000372748 TMPRSS7Q7RTY8 843 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 TUSC5Q8IXB3 177 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 DRAM1Q8N682 238 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 OR1L1Q8NH94 360 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 NAGKQ9UJ70 344 aa12.48□□□□□ -0.41
COL9A2-202ENST00000372748 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms