RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 IGKV1D-42A0A075B6H8 117 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 CELA2AP08217 269 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 WNT5AP41221 380 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 SCGB1D4Q6XE38 83 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 HSPB8Q9UJY1 196 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 OR51B2Q9Y5P1 312 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 SCN5AQ14524 2016 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 K7N7A8 449 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 HYPMO75409 117 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 NDUFB4O95168 129 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 SSX8Q7RTT4 187 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 DPF1Q92782 380 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PAXXQ9BUH6 204 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 POLEQ07864 2286 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 A0A1W2PPE3 182 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 HKR1P10072 659 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 RTP5Q14D33 572 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 STPG1Q5TH74 334 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF343Q6P1L6 599 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 OR5R1Q8NH85 324 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 SNRNP40Q96DI7 357 aaKnown RBP9.86□□□□□ -0.83
PTPRF-203ENST00000372407 TBX15Q96SF7 602 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 NPIPB13A6NJU9 1138 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 NPIPB4C9JG80 1138 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 TRGC2P03986 189 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 CD99P14209 185 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 CCL8P80075 99 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 NHLRC3Q5JS37 347 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 PQLC2Q6ZP29 291 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 FGFRL1Q8N441 504 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 C5orf66Q9H5L9 145 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 ZMAT5Q9UDW3 170 aaKnown RBP9.86□□□□□ -0.83
PTPRF-203ENST00000372407 ZSWIM8A7E2V4 1837 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 TMEM14DPA8MWL7 114 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 OR2H2O95918 312 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 FGF5P12034 268 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 HIST1H1BP16401 226 aaKnown RBP9.86□□□□□ -0.83
PTPRF-203ENST00000372407 RPL27AP46776 148 aaKnown RBP9.86□□□□□ -0.83
PTPRF-203ENST00000372407 UNC119Q13432 240 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 Q5BKY6 102 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 PKIBQ9C010 78 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 SLC25A10Q9UBX3 287 aaPredicted RBP9.86□□□□□ -0.83
PTPRF-203ENST00000372407 HS3ST3B1Q9Y662 390 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 DIRC3C9JPN6 131 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 CD74P04233 296 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 CCDC144NLQ6NUI1 221 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 SLC25A45Q8N413 288 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 APCDD1LQ8NCL9 501 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 DLL3Q9NYJ7 618 aa9.86□□□□□ -0.83
PTPRF-203ENST00000372407 PGLYRP1O75594 196 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF25P17030 456 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-203ENST00000372407 REG1BP48304 166 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 SUCLG1P53597 346 aaKnown RBP9.85□□□□□ -0.83
PTPRF-203ENST00000372407 MEGF10Q96KG7 1140 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 P2RX4Q99571 388 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 GPR146Q96CH1 333 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 Q96M66 194 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 G6PC2Q9NQR9 355 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 SPAARA0A1B0GVQ0 90 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 SIGLEC5O15389 551 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-203ENST00000372407 MC5RP33032 325 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 HERVK_113P61574 105 aa9.85□□□□□ -0.83
PTPRF-203ENST00000372407 IGLV3-21P80748 117 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-203ENST00000372407 IGHV1-45A0A0A0MS14 117 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 A6NDN8 102 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF137PP52743 207 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 GCSAMQ8N6F7 178 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SHISA3A0PJX4 238 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 H0YL77 283 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 CDX4O14627 284 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SRP14P37108 136 aaKnown RBP9.84□□□□□ -0.83
PTPRF-203ENST00000372407 LRRC75BQ2VPJ9 315 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SDHCQ99643 169 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-203ENST00000372407 DCAF16Q9NXF7 216 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 MYOFQ9NZM1 2061 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 KLF4O43474 513 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 LINC00869P0C866 280 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 APELAP0DMC3 54 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SCNM1Q9BWG6 230 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 CACNA1HO95180 2353 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 CEACAM18A8MTB9 384 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 PRR33A8MZF0 331 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 KLK2P20151 261 aa9.84□□□□□ -0.83
PTPRF-203ENST00000372407 SLC35E4Q6ICL7 350 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms