RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RNF212Q495C1 297 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 ZBTB34Q8NCN2 500 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 IFNL4K9M1U5 179 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 NPFFO15130 113 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 WFDC12Q8WWY7 111 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 C11orf68Q9H3H3 251 aaKnown RBP8.44□□□□□ -1.06
COL4A6-202ENST00000372216 IL36RNQ9UBH0 155 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 FBXL17Q9UF56 701 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 TBL2Q9Y4P3 447 aaKnown RBP8.44□□□□□ -1.06
COL4A6-202ENST00000372216 IGLV3-19P01714 112 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 TEX29Q8N6K0 151 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 CYB5R1Q9UHQ9 305 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 MGST3O14880 152 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 MAS1LP35410 378 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM255AQ5JRV8 349 aa8.44□□□□□ -1.06
COL4A6-202ENST00000372216 A0A0G2JMZ2 1700 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 LRRC37A2A6NM11 1700 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM189A5PLL7 270 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 NUDT3O95989 172 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
COL4A6-202ENST00000372216 IGLV3-21P80748 117 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-202ENST00000372216 GCSAMQ8N6F7 178 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 ABHD17AQ96GS6 310 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 SCNM1Q9BWG6 230 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 MMP26Q9NRE1 261 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PPIAL4CA0A0B4J2A2 164 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 HBZP02008 142 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF735P0CB33 412 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PPIAL4GP0DN37 164 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 IER3P46695 156 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 DLX6P56179 175 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 KCNE5Q9UJ90 142 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 KLK13Q9UKR3 277 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 FGF12P61328 243 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 MRPL24Q96A35 216 aaKnown RBP8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PGLYRP3Q96LB9 341 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 SPAG17Q6Q759 2223 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PAGE4O60829 102 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PRSS2P07478 247 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-202ENST00000372216 IRF3Q14653 427 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 SLC25A42Q86VD7 318 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 VKORC1L1Q8N0U8 176 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 F5P12259 2224 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 NKX2-6A6NCS4 301 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 APCSP02743 223 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 CELA3AP09093 270 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 CDKN1AP38936 164 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM50BP56557 158 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 C11orf91Q3C1V1 193 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 PATJQ8NI35 1801 aa8.43□□□□□ -1.06
COL4A6-202ENST00000372216 KLF7O75840 302 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 IFI6P09912 130 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 SUCLG1P53597 346 aaKnown RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 ACSF3Q4G176 576 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 LYRM7Q5U5X0 104 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM91Q6ZNR0 172 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 PNKDQ8N490 385 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 KLF14Q8TD94 323 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM54Q969K7 222 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 GPHA2Q96T91 129 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 WFDC6Q9BQY6 131 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 MIOXQ9UGB7 285 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 GPX1P07203 203 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 RFPL3SP0C7P2 107 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 OTX1P32242 354 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM33P57088 247 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 AANATQ16613 207 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 LRRC75BQ2VPJ9 315 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 PAXXQ9BUH6 204 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 PHLDA3Q9Y5J5 127 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 WNT9BO14905 357 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 C21orf62-AS1Q17RA5 79 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 HOGA1Q86XE5 327 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 IGLV1-36A0A0B4J1U3 117 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 RAG2P55895 527 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 HLA-DRB5Q30154 266 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 OR4C13Q8NGP0 309 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 V9GYH0 126 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 DOCK3Q8IZD9 2030 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 HSPB1P04792 205 aaKnown RBP8.42□□□□□ -1.06
COL4A6-202ENST00000372216 OR4A47Q6IF82 309 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 CTHRC1Q96CG8 243 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 PGLYRP4Q96LB8 373 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 AMELYQ99218 206 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 LHFPL6Q9Y693 200 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 RALGAPA2Q2PPJ7 1873 aa8.42□□□□□ -1.06
COL4A6-202ENST00000372216 IGHV1-69-2A0A0G2JMI3 117 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 ALX3O95076 343 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 CX3CL1P78423 397 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 RELBQ01201 579 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 FAM106AQ4KMX7 169 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms