RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GPR183P32249 361 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 CADM4Q8NFZ8 388 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 MGST2Q99735 147 aa13.35□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 PLPP3O14495 311 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 CTSVO60911 334 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 LHFPL4Q7Z7J7 247 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 PGPEP1LA6NFU8 196 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 ZNF32P17041 273 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 ZNF362Q5T0B9 420 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-201ENST00000371817 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-201ENST00000371817 OR11G2Q8NGC1 345 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL5A1-201ENST00000371817 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 IGKV3-7A0A075B6H7 116 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 ST6GALNAC6Q969X2 333 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 CCL26Q9Y258 94 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 H0Y980 276 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 OR10W1Q8NGF6 305 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 MRGPRX1Q96LB2 322 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 A0A1W2PRS3 328 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 VENTXO95231 258 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM170BQ5T4T1 132 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 SNAI2O43623 268 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 FAM78AQ5JUQ0 283 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 SH3BGRL3Q9H299 93 aa13.34□□□□□ -0.27
COL5A1-201ENST00000371817 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
COL5A1-201ENST00000371817 TMPRSS2O15393 492 aa13.33□□□□□ -0.27
COL5A1-201ENST00000371817 PRKNO60260 465 aaPredicted RBP13.33□□□□□ -0.27
COL5A1-201ENST00000371817 HOGA1Q86XE5 327 aa13.33□□□□□ -0.27
COL5A1-201ENST00000371817 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.27
COL5A1-201ENST00000371817 CEACAM18A8MTB9 384 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 C6orf15Q6UXA7 325 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-201ENST00000371817 APCDD1LQ8NCL9 501 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 HMGCLL1Q8TB92 370 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 MPC1Q9Y5U8 109 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 KLKB1P03952 638 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 OR5AN1Q8NGI8 311 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 ATP5LO75964 103 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 OR10J6PQ8NGY7 276 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 TMUB1Q9BVT8 246 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 A0A087WWC5 75 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 SELENOTP62341 195 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 TM4SF20Q53R12 229 aa13.33□□□□□ -0.28
COL5A1-201ENST00000371817 UBE2CO00762 179 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 BHLHA15Q7RTS1 189 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-201ENST00000371817 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 CXXC4Q9H2H0 198 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 ISG15P05161 165 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 IRF3Q14653 427 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 EP300Q09472 2414 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-201ENST00000371817 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 DOT1LQ8TEK3 1739 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 MPZL1O95297 269 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 TGFAP01135 160 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 PIGYQ3MUY2 71 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 TRAV38-1A0A0B4J264 116 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 A8MXK9 166 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 FAM157AC9JC47 383 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
COL5A1-201ENST00000371817 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 C17orf51A8MQB3 221 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 RRHO14718 337 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 FUT5Q11128 374 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 GAGE13Q4V321 117 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 RPS11P62280 158 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL5A1-201ENST00000371817 MESTQ5EB52 335 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 ASB10Q8WXI3 467 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 PRDM13Q9H4Q3 707 aa13.32□□□□□ -0.28
COL5A1-201ENST00000371817 ID4P47928 161 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 GPR35Q9HC97 309 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 CRYBG1Q9Y4K1 1723 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 MSRB3Q8IXL7 192 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 MRPL43Q8N983 215 aaKnown RBP13.31□□□□□ -0.28
COL5A1-201ENST00000371817 P2RY4P51582 365 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 C1RLQ9NZP8 487 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 SCN7AQ01118 1682 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 ZNF236Q9UL36 1845 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-201ENST00000371817 APELAP0DMC3 54 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 GZMHP20718 246 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 RSPO3Q9BXY4 272 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-201ENST00000371817 ESDP10768 282 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 GFRA1P56159 465 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 C10orf111Q8N326 155 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 SRSF12Q8WXF0 261 aaKnown RBP13.31□□□□□ -0.28
COL5A1-201ENST00000371817 DNASE2BQ8WZ79 361 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms