RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 KCNS1Q96KK3 526 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 NUDT16L1Q9BRJ7 211 aaKnown RBP10.15□□□□□ -0.78
PTPN1-201ENST00000371621 LRFN3Q9BTN0 628 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 CRIM1Q9NZV1 1036 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 HSPB8Q9UJY1 196 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 TANC1Q9C0D5 1861 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 FOXL2P58012 376 aa10.15□□□□□ -0.79
PTPN1-201ENST00000371621 VASH2Q86V25 355 aa10.15□□□□□ -0.79
PTPN1-201ENST00000371621 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.79
PTPN1-201ENST00000371621 LRRK1Q38SD2 2015 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 A0A096LPE4 126 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 A0A1W2PPZ6 126 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 C7orf71A4D174 169 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF732B4DXR9 585 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 PRAMEF26H0Y7S4 382 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 LILRA1O75019 489 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 ISG15P05161 165 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 IL6RP08887 468 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 SELENOHQ8IZQ5 122 aaKnown RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 NOXO1Q8NFA2 376 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 NT5CQ8TCD5 201 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 DYSFO75923 2080 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 NRG2O14511 850 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 NUPR1O60356 82 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 PEBP1P30086 187 aaKnown RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 CEACAM6P40199 344 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF788Q6ZQV5 615 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF818PQ6ZRF7 136 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 HS3ST3A1Q9Y663 406 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 APC2O95996 2303 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 MGAMO43451 1857 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 IGKV1D-43A0A0B4J1Z2 117 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 CLEC3BP05452 202 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 GRPP07492 148 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 EN2P19622 333 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 DEFB133Q30KQ1 61 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 SMIM21Q3B7S5 101 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF324BQ6AW86 544 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 LHFPL2Q6ZUX7 228 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 GMPPAQ96IJ6 420 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-201ENST00000371621 C20orf144Q9BQM9 153 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 CDH20Q9HBT6 801 aa10.14□□□□□ -0.79
PTPN1-201ENST00000371621 UNC80Q8N2C7 3258 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 CCL2P13500 99 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 TMEM116Q8NCL8 245 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 OR2M3Q8NG83 312 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 C8orf44Q96CB5 159 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 SIGMAR1Q99720 223 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 CD207Q9UJ71 328 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 A0A087X0K7 114 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 BLACEA4D250 179 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 F2RP25116 425 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 RPL31P62899 125 aaKnown RBP10.13□□□□□ -0.79
PTPN1-201ENST00000371621 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 GPX7Q96SL4 187 aaPredicted RBP10.13□□□□□ -0.79
PTPN1-201ENST00000371621 GPR35Q9HC97 309 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
PTPN1-201ENST00000371621 LCTP09848 1927 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
PTPN1-201ENST00000371621 PRDX4Q13162 271 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 FGF14Q92915 247 aa10.13□□□□□ -0.79
PTPN1-201ENST00000371621 SAP30O75446 220 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 IGFBP3P17936 291 aaPredicted RBP10.12□□□□□ -0.79
PTPN1-201ENST00000371621 RND2P52198 227 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 SPSB1Q96BD6 273 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 GP6Q9HCN6 339 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 FER1L5A0AVI2 2057 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 PAPPA2Q9BXP8 1791 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 KIR2DS5A0A0G2JLQ3 304 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 A0A0G2JNG1 304 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 KIR2DS3K7RE56 304 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 KIR2DS5Q14953 304 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 FAM206AQ9NX38 181 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 ZNF319Q9P2F9 582 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 FBXL7Q9UJT9 491 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 DOCK4Q8N1I0 1966 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 CREBBPQ92793 2442 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 SCO2A0A1W2PP80 73 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 DHHO43323 396 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 LYPD3O95274 346 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 ERGP11308 486 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 CKS1BP61024 79 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 ACTL10Q5JWF8 245 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
PTPN1-201ENST00000371621 ARL14EPLP0DKL9 152 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 CRYBB3P26998 211 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 ASB10Q8WXI3 467 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 TMEM70Q9BUB7 260 aa10.11□□□□□ -0.79
PTPN1-201ENST00000371621 IGHV3-43A0A0B4J1X8 118 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms