RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PMP22Q01453 160 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 FBXO46Q6PJ61 603 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 UNQ5815/PRO19632Q6UWF5 114 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 LSM10Q969L4 123 aaKnown RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 NEIL1Q96FI4 390 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TMEM204Q9BSN7 226 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 GAL3ST2Q9H3Q3 398 aa9.83□□□□□ -0.84
SMARCA1-201ENST00000371121 TRAV39A0A0B4J263 110 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 RAMP3O60896 148 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 TIMP3P35625 211 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 FUT6P51993 359 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 VWC2Q2TAL6 325 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 TMEM240Q5SV17 173 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 OR8G2PQ6IF36 304 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 C1orf174Q8IYL3 243 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 OR4F17Q8NGA8 305 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 NPCDR1Q9BY65 106 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 SLC17A3O00476 420 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 OR5G3P0C626 314 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 THBS3P49746 956 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 YAF2Q8IY57 180 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 ORAOV1Q8WV07 137 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 ERRFI1Q9UJM3 462 aaPredicted RBP9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 CNTRLQ7Z7A1 2325 aa9.82□□□□□ -0.84
SMARCA1-201ENST00000371121 TRAV24A0A0B4J272 114 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 M0QZ24 198 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 TNFSF11O14788 317 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 IFNA1P01562 189 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 NIT1Q86X76 327 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 OR1F12Q8NHA8 337 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 SPTSSAQ969W0 71 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 KLHDC7BQ96G42 594 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 C1orf159Q96HA4 380 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 GNB4Q9HAV0 340 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 CA3P07451 260 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF32P17041 273 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 PLCXD3Q63HM9 321 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 PIGCQ92535 297 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF488Q96MN9 340 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 CSMD1Q96PZ7 3565 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 PAFAH1B2P68402 229 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 MSMO1Q15800 293 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 CADM4Q8NFZ8 388 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 SPSB4Q96A44 273 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 MRPL18Q9H0U6 180 aaKnown RBP9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 FREM1Q5H8C1 2179 aa9.81□□□□□ -0.84
SMARCA1-201ENST00000371121 MED12LQ86YW9 2145 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 TRAV38-1A0A0B4J264 116 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 A0A1B0GX78 115 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 NXPH2O95156 264 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 B4GALT1P15291 398 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF83P51522 516 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 UBE2G2P60604 165 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 Q0VG73 95 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 DEFB133Q30KQ1 61 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 MORN2Q502X0 79 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 ST6GALNAC3Q8NDV1 305 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 WIPI2Q9Y4P8 454 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 SYNGR4O95473 234 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 HNF1AP20823 631 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 FGF12P61328 243 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 UBE2V1Q13404 147 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 SPATA45Q537H7 98 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 PRAMEF20Q5VT98 475 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 OR5AU1Q8NGC0 362 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 PSMF1Q92530 271 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 SGCZQ96LD1 299 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 CLN8Q9UBY8 286 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 LAMTOR2Q9Y2Q5 125 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 USF3Q68DE3 2245 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 A0A1W2PS18 150 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 SYNGR1O43759 233 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 ZIC3O60481 467 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 CLDN14O95500 239 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 IGHEP01854 428 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 LGALS4P56470 323 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 TPPP2P59282 170 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 LEMD1Q68G75 181 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 COX11Q9Y6N1 276 aa9.8□□□□□ -0.84
SMARCA1-201ENST00000371121 IGLV3-12A0A075B6K2 115 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF816-ZNF321PA0A0X1KG74 233 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF503-AS2A6NEH8 195 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 NEUROG1Q92886 237 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 HSPB7Q9UBY9 170 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 CABIN1Q9Y6J0 2220 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 AQP7O14520 342 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 CELA2AP08217 269 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 HBG1P69891 147 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 HBG2P69892 147 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 UBALD1Q8TB05 177 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms