RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 C10orf35Q96D05 121 aa10.99□□□□□ -0.65
GPC4-201ENST00000370828 LRRC61Q9BV99 259 aa10.99□□□□□ -0.65
GPC4-201ENST00000370828 SAP30LQ9HAJ7 183 aa10.99□□□□□ -0.65
GPC4-201ENST00000370828 GAGE2DQ9UEU5 116 aa10.99□□□□□ -0.65
GPC4-201ENST00000370828 SPTY2D1-AS1A0A0U1RR47 76 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 LOC101059948A0A1B0GTJ6 334 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 HLA-DQA1P01909 254 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 RTBDNQ9BSG5 229 aaPredicted RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 QTRT1Q9BXR0 403 aaKnown RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 RTTNQ86VV8 2226 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 CCL20P78556 96 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 GAB4Q2WGN9 574 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 FLYWCH2Q96CP2 140 aaKnown RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 AMBPP02760 352 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 RELBQ01201 579 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 PDPNQ86YL7 162 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 ATG2BQ96BY7 2078 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 DEFB127Q9H1M4 99 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 SDF2L1Q9HCN8 221 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 TBL2Q9Y4P3 447 aaKnown RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 A0A1W2PQD3 144 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 MKRN2OSH3BPM6 223 aa10.98□□□□□ -0.65
GPC4-201ENST00000370828 SRSF4Q08170 494 aaKnown RBP10.98□□□□□ -0.65
GPC4-201ENST00000370828 IGKV1D-42A0A075B6H8 117 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 ZNF488Q96MN9 340 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 PXMP4Q9Y6I8 212 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 CEP290O15078 2479 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 WNK3Q9BYP7 1800 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 SVILO95425 2214 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 SCN2AQ99250 2005 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 ERGP11308 486 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 C1orf194Q5T5A4 169 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 MMD2Q8IY49 270 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 OR4S2Q8NH73 311 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 CLDND2Q8NHS1 167 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 GFI1Q99684 422 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
GPC4-201ENST00000370828 IL36RNQ9UBH0 155 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 EREGO14944 169 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 SELENOTP62341 195 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 SLC35E4Q6ICL7 350 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 CYP2G1PQ6ZSU1 146 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 GNB4Q9HAV0 340 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 BTAF1O14981 1849 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 LOC107984156A0A0G2JMH3 177 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
GPC4-201ENST00000370828 ICAM4Q14773 271 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 ARL17AQ8IVW1 177 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 NHSL1Q5SYE7 1610 aa10.97□□□□□ -0.65
GPC4-201ENST00000370828 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 TMEM250H0YL14 139 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 RBFOX2O43251 390 aaKnown RBP eCLIP10.96□□□□□ -0.65
GPC4-201ENST00000370828 CEACAM1P13688 526 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 GCSHP23434 173 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 DCAF12Q5T6F0 453 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 FDX2Q6P4F2 183 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 TEPPQ6URK8 271 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 TMEM230Q96A57 120 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 WDYHV1Q96HA8 205 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 UBE2ZQ9H832 354 aaPredicted RBP10.96□□□□□ -0.65
GPC4-201ENST00000370828 SCN4AP35499 1836 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 RBP4P02753 201 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 ABHD14BQ96IU4 210 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 UCN2Q96RP3 112 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 GABRG3Q99928 467 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 SARGQ9BW04 601 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 LAMB2P55268 1798 aa10.96□□□□□ -0.65
GPC4-201ENST00000370828 PGLYRP1O75594 196 aaPredicted RBP10.96□□□□□ -0.66
GPC4-201ENST00000370828 RPL11P62913 178 aaKnown RBP10.96□□□□□ -0.66
GPC4-201ENST00000370828 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 TMEM144Q7Z5S9 345 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 OR8B2Q96RD0 313 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 MIC13Q5XKP0 118 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 TMEM116Q8NCL8 245 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 OR1B1Q8NGR6 318 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.66
GPC4-201ENST00000370828 ZNF646O15015 1829 aaPredicted RBP10.96□□□□□ -0.66
GPC4-201ENST00000370828 A0A1W2PPC4 97 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 LILRA5A6NI73 299 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 ZNF735P0CB33 412 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 TM4SF4P48230 202 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 LILRA6Q6PI73 481 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 ZNF788Q6ZQV5 615 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 R4GN57 208 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 SNAI2O43623 268 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 GDF9O60383 454 aa10.95□□□□□ -0.66
GPC4-201ENST00000370828 OR4A8P0C604 315 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms