RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TMEM246Q9BRR3 403 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 DCTN5Q9BTE1 182 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 SPACA1Q9HBV2 294 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 HRASLSQ9HDD0 168 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PPIAL4AQ9Y536 164 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 KIAA2026Q5HYC2 2103 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 HECTD1Q9ULT8 2610 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ARID1AO14497 2285 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 K7N7A8 449 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 SIGLEC5O15389 551 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 LYRM1O43325 122 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 SNAPINO95295 136 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 IGHV2-70P01814 119 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 PMP2P02689 132 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 CD74P04233 296 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 NHLRC4P0CG21 123 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 DTYMKP23919 212 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 RCVRNP35243 200 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GPR12P47775 334 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GLIPR1P48060 266 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 EFNA4P52798 201 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 SSBP1Q04837 148 aaKnown RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 AESQ08117 197 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ATXN7L3Q14CW9 347 aaPredicted RBP2.92□□□□□ -1.94
MCF2-202ENST00000370573 MICBQ29980 383 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 AVPI1Q5T686 147 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 FAAP20Q6NZ36 180 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 ZNF880Q6PDB4 577 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 NRARPQ7Z6K4 114 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 C1orf87Q8N0U7 546 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 TPRX1Q8N7U7 411 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 OR4C16Q8NGL9 310 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 OR4K15Q8NH41 348 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 OR56B4Q8NH76 319 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 NEK7Q8TDX7 302 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 CCDC107Q8WV48 283 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 C14orf79Q96F83 325 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 SLC6A7Q99884 636 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 Q9N2K0 584 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 OR6C3Q9NZP0 311 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 CTSZQ9UBR2 303 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 GLS2Q9UI32 602 aa2.92□□□□□ -1.94
MCF2-202ENST00000370573 UNC79Q9P2D8 2635 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 PDZD2O15018 2839 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 TRAV38-1A0A0B4J264 116 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 IGKV1-6A0A0C4DH72 117 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MEX3AA1L020 520 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF736B4DX44 427 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 GATCO43716 136 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 FSTL3O95633 263 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 RAB3DO95716 219 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SCTP09683 121 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CGB3P0DN86 165 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CGB7P0DN87 165 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 HRH1P35367 487 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 INPP1P49441 399 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CCR6P51684 374 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ACTBP60709 375 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 BTG1P62324 171 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ACTG1P63261 375 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 RBM39Q14498 530 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 GRK1Q15835 563 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SLC35E4Q6ICL7 350 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 STEAP1BQ6NZ63 245 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF767PQ75MW2 155 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF561Q8N587 486 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 BEST4Q8NFU0 473 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 UBALD1Q8TB05 177 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CCL19Q99731 98 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 AAMDCQ9H7C9 122 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF665Q9H7R5 613 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 IFT46Q9NQC8 304 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF701Q9NV72 531 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 KAAG1Q9UBP8 84 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF107Q9UII5 783 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 KIF25Q9UIL4 384 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 GPR132Q9UNW8 380 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MALRD1Q5VYJ5 2156 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MED13LQ71F56 2210 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ANKRD17O75179 2603 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 TMEM30CPA0ZSE6 113 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 TRDCB7Z8K6 153 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SDCBPO00560 298 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 DVL1O14640 695 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 PPIHO43447 177 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 CSN2P05814 226 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 AKAIN1P0CW23 69 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 AREGP15514 252 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 GIFP27352 417 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SLC6A1P30531 599 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MDH2P40926 338 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 TMEM33P57088 247 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 TAS2R19P59542 299 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 DEFA1P59665 94 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 DEFA3P59666 94 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 POLR2GP62487 172 aaKnown RBP eCLIP2.91□□□□□ -1.94
MCF2-202ENST00000370573 IFITM2Q01629 132 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 PAX5Q02548 391 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms