RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CGAP01215 116 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 LYL1P12980 280 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 UCP2P55851 309 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 TOMM20LQ6UXN7 152 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 ZNF573Q86YE8 665 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 C11orf42Q8N5U0 333 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 WDR31Q8NA23 367 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 OR5C1Q8NGR4 320 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 RNASE8Q8TDE3 154 aaKnown RBP8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 TBX15Q96SF7 602 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 DNAJC4Q9NNZ3 241 aa8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 ZNF71Q9NQZ8 489 aaPredicted RBP8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 SPTBN1Q01082 2364 aaKnown RBP8.47□□□□□ -1.05
PRPF38B-203ENST00000370025 APC2O95996 2303 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 A0A0U1RQK1 487 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 CEBPZOSA8MTT3 80 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 K7ENP7 123 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 PHF1O43189 567 aaPredicted RBP8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 PDCD6O75340 191 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 AGFG2O95081 481 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 BMP5P22003 454 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 GNMTQ14749 295 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 TESK1Q15569 626 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 ANKRD39Q53RE8 183 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 BHLHA15Q7RTS1 189 aaPredicted RBP8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 GINS3Q9BRX5 216 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 OR2J1Q9GZK6 312 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.05
PRPF38B-203ENST00000370025 ACACAQ13085 2346 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 K7N7A8 449 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 IGKV3-15P01624 115 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 RAC2P15153 192 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 CA6P23280 308 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 TIMP3P35625 211 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 NPBWR2P48146 333 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 ERVFC1-1P60608 527 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 IL15RAQ13261 267 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 TBR1Q16650 682 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 SPSB3Q6PJ21 355 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 Q8NFD4 153 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM57AQ8TBR7 257 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 PLEKHA2Q9HB19 425 aa8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 UBE2J1Q9Y385 318 aaPredicted RBP8.46□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A10PA6NDY2 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A18PA6NE21 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A16PA6NEW6 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A20PA6NIJ5 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A8PA6NJQ4 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A7PA6NKC0 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A22PA8MWA6 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A12PA8MX19 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A5PA8MXJ8 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A23PA8MXZ1 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 PPP5D1E7EU14 171 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 HSPA12AO43301 675 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A15PP0C7V4 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A13PP0C7W8 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A14PP0C7W9 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM90A24PP0C7X0 464 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 BCL3P20749 454 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 DTYMKP23919 212 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 EWSR1Q01844 656 aaKnown RBP eCLIP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 IQCJQ1A5X6 159 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 BEND2Q8NDZ0 799 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 LFNGQ8NES3 379 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 SLC25A40Q8TBP6 338 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 RTN4IP1Q8WWV3 396 aaPredicted RBP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 SYT3Q9BQG1 590 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FGF23Q9GZV9 251 aaPredicted RBP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 ZNF581Q9P0T4 197 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM215AQ9Y5M1 114 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 NBEAQ8NFP9 2946 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 FGF12P61328 243 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 MRPS11P82912 194 aaKnown RBP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 LGI3Q8N145 548 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 EXTL1Q92935 676 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 RTL8AQ9BWD3 113 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 LPAR2Q9HBW0 351 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 LILRA1O75019 489 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 VHLLQ6RSH7 139 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 PLK3Q9H4B4 646 aa8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 POLR3KQ9Y2Y1 108 aaPredicted RBP8.45□□□□□ -1.06
PRPF38B-203ENST00000370025 AKAP13Q12802 2813 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 TRAV39A0A0B4J263 110 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 HPRT1P00492 218 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 TMEM256Q8N2U0 113 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 TMEM171Q8WVE6 324 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 MTCH1Q9NZJ7 389 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 MED13LQ71F56 2210 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 PRRG2O14669 202 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 MAS1LP35410 378 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 FAM3BP58499 235 aaPredicted RBP8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 ZNF154Q13106 437 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 CISD2Q8N5K1 135 aaKnown RBP8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 OR51H1Q8NH63 302 aa8.44□□□□□ -1.06
PRPF38B-203ENST00000370025 R3HDM4Q96D70 268 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms