RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 SLC35E1Q96K37 410 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 ELOVL5Q9NYP7 299 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 A0A0J9YW62 118 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 CBR3O75828 277 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 CDC34P49427 236 aaPredicted RBP12.2□□□□□ -0.46
PHTF1-204ENST00000369604 GNB1P62873 340 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 COTL1Q14019 142 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 SFRP2Q96HF1 295 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 FOXB1Q99853 325 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 WNT5BQ9H1J7 359 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
PHTF1-204ENST00000369604 CCL2P13500 99 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
PHTF1-204ENST00000369604 ZNF114Q8NC26 417 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
PHTF1-204ENST00000369604 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 TECTBQ96PL2 329 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 OR6C1Q96RD1 312 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
PHTF1-204ENST00000369604 A0A1W2PPV4 95 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A10PA6NDY2 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A18PA6NE21 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A16PA6NEW6 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A20PA6NIJ5 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A8PA6NJQ4 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A7PA6NKC0 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A22PA8MWA6 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A12PA8MX19 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A5PA8MXJ8 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A23PA8MXZ1 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A15PP0C7V4 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A13PP0C7W8 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A14PP0C7W9 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FAM90A24PP0C7X0 464 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 MCEMP1Q8IX19 187 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 FADS6Q8N9I5 356 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
PHTF1-204ENST00000369604 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
PHTF1-204ENST00000369604 NBEAQ8NFP9 2946 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 CACNA1DQ01668 2161 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 FCN1O00602 326 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 SYNGR1O43759 233 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 TIAF1O95411 115 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 FOXL1Q12952 345 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 ANKRD39Q53RE8 183 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 TMPRSS7Q7RTY8 843 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 ASPMQ8IZT6 3477 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 CARD18P57730 90 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 Q6ZN92 141 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 MRPL21Q7Z2W9 205 aaKnown RBP12.18□□□□□ -0.46
PHTF1-204ENST00000369604 OR10G8Q8NGN5 311 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 ZNF586Q9NXT0 402 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 EML6Q6ZMW3 1958 aa12.18□□□□□ -0.46
PHTF1-204ENST00000369604 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 PDE6DO43924 150 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 CHCHD2Q9Y6H1 151 aaPredicted RBP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 MLNRO43193 412 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 SCRG1O75711 98 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 CELA2AP08217 269 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 OR5G3P0C626 314 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 IER3P46695 156 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 PCBD1P61457 104 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 SRSF7Q16629 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 SPATA45Q537H7 98 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 F2Z2F3 143 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 SPINK4O60575 86 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 YPEL1O60688 119 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 CD99P14209 185 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 NTF4P34130 210 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 HNRNPA3P51991 378 aaKnown RBP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 EDDM3BP56851 147 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 OR1L1Q8NH94 360 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 CRIM1Q9NZV1 1036 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
PHTF1-204ENST00000369604 COL5A1P20908 1838 aaPredicted RBP12.17□□□□□ -0.46
PHTF1-204ENST00000369604 CACNA1EQ15878 2313 aa12.16□□□□□ -0.46
PHTF1-204ENST00000369604 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms