RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 H7C2Y5 167 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 CASQ2O14958 399 aaPredicted RBP12.34□□□□□ -0.43
CKS1B-202ENST00000368436 SOCS1O15524 211 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 HSPB1P04792 205 aaKnown RBP12.34□□□□□ -0.43
CKS1B-202ENST00000368436 UCHL1P09936 223 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 GP9P14770 177 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 ZBTB25P24278 435 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 CEACAM6P40199 344 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 PLGLAQ15195 96 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 PSG5Q15238 335 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 SPHARQ15513 63 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 ACTBL2Q562R1 376 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
CKS1B-202ENST00000368436 RHOVQ96L33 236 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 HSF4Q9ULV5 492 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 MGAT4AQ9UM21 535 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
CKS1B-202ENST00000368436 FRMD6-AS1P0C7T7 363 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
CKS1B-202ENST00000368436 UNQ5815/PRO19632Q6UWF5 114 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 OVCH2Q7RTZ1 564 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 MUC7Q8TAX7 377 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 ARPC1AQ92747 370 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 GFI1Q99684 422 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
CKS1B-202ENST00000368436 FAM103A1Q9BTL3 118 aaKnown RBP12.33□□□□□ -0.44
CKS1B-202ENST00000368436 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
CKS1B-202ENST00000368436 SLA2Q9H6Q3 261 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 Q9N2K0 584 aa12.33□□□□□ -0.44
CKS1B-202ENST00000368436 METTL1Q9UBP6 276 aaKnown RBP12.33□□□□□ -0.44
CKS1B-202ENST00000368436 PTGES3LE9PB15 166 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
CKS1B-202ENST00000368436 SPDEFO95238 335 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 SCTP09683 121 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 TMEM50BP56557 158 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 TPPP2P59282 170 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 IRF3Q14653 427 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 ZNF383Q8NA42 475 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 MS4A10Q96PG2 267 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 CLCC1Q96S66 551 aa12.32□□□□□ -0.44
CKS1B-202ENST00000368436 TSNAXQ99598 290 aaKnown RBP12.32□□□□□ -0.44
CKS1B-202ENST00000368436 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
CKS1B-202ENST00000368436 DNAH7Q8WXX0 4024 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 TRIM64CA6NLI5 447 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 SLC17A2O00624 439 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 HSPA12AO43301 675 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 CA2P00918 260 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 TFAP2AP05549 437 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 ARSBP15848 533 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 CPEP16870 476 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 CD40LGP29965 261 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 PITPNAQ00169 270 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 P2RY14Q15391 338 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 MED22Q15528 200 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 CASC10Q5T4H9 136 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 LCE2DQ5TA82 110 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-202ENST00000368436 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 PDPNQ86YL7 162 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-202ENST00000368436 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
CKS1B-202ENST00000368436 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 LINC00205P59089 165 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 LIPKQ5VXJ0 399 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 UFD1Q92890 307 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 OR4C12Q96R67 309 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 ZNF221Q9UK13 617 aa12.3□□□□□ -0.44
CKS1B-202ENST00000368436 H3BUA1 57 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 TRGV3P03979 118 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 RPS16P62249 146 aaKnown RBP12.29□□□□□ -0.44
CKS1B-202ENST00000368436 SSBP2P81877 361 aaPredicted RBP12.29□□□□□ -0.44
CKS1B-202ENST00000368436 TPBGQ13641 420 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 FXYD3Q14802 87 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 Q8N1Y9 231 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 TMEM203Q969S6 136 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 PECRQ9BY49 303 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 SCN3BQ9NY72 215 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 RDH8Q9NYR8 311 aa12.29□□□□□ -0.44
CKS1B-202ENST00000368436 AK6Q9Y3D8 172 aaKnown RBP12.29□□□□□ -0.44
CKS1B-202ENST00000368436 TRDCB7Z8K6 153 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 SLC25A17O43808 307 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 BRI3O95415 125 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 IGLV1-51P01701 117 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 APOA2P02652 100 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 CRYGBP07316 175 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 VEGFCP49767 419 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 TRAM1Q15629 374 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 RAB11BQ15907 218 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 PLAC9Q5JTB6 97 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms