RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 SOCS1O15524 211 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-209ENST00000367257 FCGR3AP08637 254 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ERGP11308 486 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 LIFP15018 202 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ORM2P19652 201 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 IER3P46695 156 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 TFPI2P48307 235 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-209ENST00000367257 TPTE2P1Q5T6R2 138 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 BATF2Q8N1L9 274 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 PIMREGQ9BSJ6 248 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 LHX9Q9NQ69 397 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 NKX2-6A6NCS4 301 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 TMEM250H0YL14 139 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 NUDT3O95989 172 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 IGHMP01871 453 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ZNF83P51522 516 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 FBXW9Q5XUX1 488 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ZNF645Q8N7E2 425 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 NPDC1Q9NQX5 325 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-209ENST00000367257 CCL28Q9NRJ3 127 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 SERGEFQ9UGK8 458 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 TRBV5-7A0A0A0MS05 114 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 ASAH2BP0C7U1 165 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 LCN2P80188 198 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 SPATA46Q5T0L3 261 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 WDR25Q64LD2 544 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-209ENST00000367257 MMD2Q8IY49 270 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 GVQW1Q8N7I0 195 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 HARBI1Q96MB7 349 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 SDHCQ99643 169 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-209ENST00000367257 SPCS1Q9Y6A9 102 aa7.75□□□□□ -1.17
SYNE1-209ENST00000367257 C5orf67F2Z3F1 127 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 PPIHO43447 177 aaKnown RBP7.74□□□□□ -1.17
SYNE1-209ENST00000367257 ID4P47928 161 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 VSIG4Q9Y279 399 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 MKI67P46013 3256 aaKnown RBP7.74□□□□□ -1.17
SYNE1-209ENST00000367257 J3QR06 171 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 OR2A4O95047 310 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 LIMS1P48059 325 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-209ENST00000367257 SHISA5Q8N114 240 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 OR2A7Q96R45 310 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 LPAR2Q9HBW0 351 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 GP6Q9HCN6 339 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 OR51B2Q9Y5P1 312 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 ASXL3Q9C0F0 2248 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 TRAV39A0A0B4J263 110 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 GHRHP01286 108 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 EFNB1P98172 346 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 UNQ9370/PRO34162Q6UXP9 181 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 MUC15Q8N387 334 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 AQP3Q92482 292 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 K7N7A8 449 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 WNT9BO14905 357 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 S1PR2O95136 353 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 CD74P04233 296 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 CT62P0C5K7 136 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 VSIG10L2P0DP72 767 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 DRD3P35462 400 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 OR2I1PQ8NGU4 316 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 PLSCR4Q9NRQ2 329 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 ELOVL5Q9NYP7 299 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 SIP14410 1827 aa7.74□□□□□ -1.17
SYNE1-209ENST00000367257 TMEM189A5PLL7 270 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 H0YL77 283 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 AGAP20933 346 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 WDR31Q8NA23 367 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 AUP1Q9Y679 476 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 COLCA2A8K830 154 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 CLDN14O95500 239 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 KLK2P20151 261 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 GAB4Q2WGN9 574 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 TMEM252Q8N6L7 170 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 DMRTA2Q96SC8 542 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 INSIG2Q9Y5U4 225 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 HIST3H2BBQ8N257 126 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 OR13C6PQ8NH95 151 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 ABHD14AQ9BUJ0 271 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 DUSP15Q9H1R2 295 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-209ENST00000367257 ARRDC1-AS1Q9H2J1 176 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 A0A087WWC5 75 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 H3BMH7 237 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 EREGO14944 169 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 CD8AP01732 235 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 LIPFP07098 398 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 SMIM13P0DJ93 91 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 KRTCAP3Q53RY4 240 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 TCF24Q7RTU0 167 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 LYZL2Q7Z4W2 148 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 C1QL4Q86Z23 238 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 SGMS2Q8NHU3 365 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms