RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MPV17LQ2QL34 196 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM255BQ8WV15 326 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 ANGPTL4Q9BY76 406 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 GP6Q9HCN6 339 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 LSM2Q9Y333 95 aaKnown RBP7.54□□□□□ -1.2
SYNE1-206ENST00000367253 ZNF737O75373 536 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 NDUFB6O95139 128 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 HMGA2P52926 109 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 FABP5Q01469 135 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 ADIPOQQ15848 244 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 SLC35E4Q6ICL7 350 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 OR2K2Q8NGT1 345 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 P2RX4Q99571 388 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 SLC25A33Q9BSK2 321 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 CSN3P07498 182 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-206ENST00000367253 TIAL1Q01085 375 aaKnown RBP eCLIP7.54□□□□□ -1.2
SYNE1-206ENST00000367253 MMDQ15546 238 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM136Q6ZRR5 245 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 PNKDQ8N490 385 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
SYNE1-206ENST00000367253 RBFOX3A6NFN3 312 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 B4DSR2 109 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 MPZL1O95297 269 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 VPREB1P12018 145 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 MVDP53602 400 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SLC37A1P57057 533 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM99Q8N816 258 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SMIM19Q96E16 107 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 GABARAPL3Q9BY60 117 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 LOC285556D6RIA3 1793 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 A0A1B0GUS0 222 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 M0R3E3 92 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 FGF2P09038 288 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 GZMHP20718 246 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 CD40P25942 277 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 BTG2P78543 158 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 OR8B12Q8NGG6 310 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 ZNF502Q8TBZ5 544 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 Q96M85 177 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SLC7A10Q9NS82 523 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 IGLV3-10A0A075B6K4 115 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 A0A0J9YW62 118 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 KBTBD11-OT1A0A1B0GTJ5 212 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 CTSVO60911 334 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 KLF7O75840 302 aaPredicted RBP7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PGA3P0DJD8 388 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 GLRXP35754 106 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 UCP2P55851 309 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PABPC1L2AQ5JQF8 200 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SPATA46Q5T0L3 261 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 OR1P1Q8NH06 330 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 NRN1Q9NPD7 142 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 KLK11Q9UBX7 282 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PRSS50Q9UI38 385 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 U3KQE9 123 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 NPIPB6E9PJ23 425 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PSG1P11464 419 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SNRPD3P62318 126 aaKnown RBP7.53□□□□□ -1.2
SYNE1-206ENST00000367253 RPL30P62888 115 aaKnown RBP7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 OR4P4Q8NGL7 312 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 LYPD6BQ8NI32 183 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 UBALD1Q8TB05 177 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 LINC01560Q8TB33 94 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 OR51E1Q8TCB6 317 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 SH2D2AQ9NP31 389 aa7.53□□□□□ -1.2
SYNE1-206ENST00000367253 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
SYNE1-206ENST00000367253 PRSS37A4D1T9 235 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 ONECUT2O95948 504 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 ZBTB25P24278 435 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 NMUP48645 174 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 DMRTC2Q8IXT2 367 aaPredicted RBP7.52□□□□□ -1.2
SYNE1-206ENST00000367253 OR10G4Q8NGN3 311 aa7.52□□□□□ -1.2
SYNE1-206ENST00000367253 HSD17B10Q99714 261 aaKnown RBP7.52□□□□□ -1.2
SYNE1-206ENST00000367253 PLXNB2O15031 1838 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ZAR1LA6NP61 321 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ZG16O60844 167 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 SBK3P0C264 359 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 FZD5Q13467 585 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 CDK5R1Q15078 307 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 TNXAQ16473 311 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ANXA2RQ3ZCQ2 193 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 UNQ5815/PRO19632Q6UWF5 114 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 MOGAT3Q86VF5 341 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 TMEM38BQ9NVV0 291 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ANXA10Q9UJ72 324 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 H7C2G1 150 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms