RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 PGPA6NDG6 321 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 IBA57Q5T440 356 aaKnown RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 LSM10Q969L4 123 aaKnown RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 TNFSF18Q9UNG2 199 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 PRSS2P07478 247 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 LOC102724200A0A096LPH7 203 aaPredicted RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 TRGC1P0CF51 173 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 ZNF826PQ6ZT77 177 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 RBKSQ9H477 322 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 RALYQ9UKM9 306 aaKnown RBP13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 SAP25Q8TEE9 199 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 KLK13Q9UKR3 277 aa13.55□□□□□ -0.24
NUCKS1-201ENST00000367142 DOCK1Q14185 1865 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 TRAV20A0A0B4J274 112 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 STPG2Q8N412 459 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 GEMIN7Q9H840 131 aaKnown RBP13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 ODAMA1E959 279 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 SMUG1Q53HV7 270 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 SLC22A18ASQ8N1D0 253 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 PNKDQ8N490 385 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 ALKBH7Q9BT30 221 aaPredicted RBP13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 GLI3P10071 1580 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 IL11P20809 199 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 RSPO4Q2I0M5 234 aaPredicted RBP13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 NCMAPQ5T1S8 102 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 PLAUP00749 431 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 SSTR5P35346 364 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 TXNDC17Q9BRA2 123 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 TCTAP57738 103 aa13.54□□□□□ -0.24
NUCKS1-201ENST00000367142 IGKV1D-16P01601 117 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 DIRC3C9JPN6 131 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 TSPAN2O60636 221 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 PTP4A3O75365 173 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 ASAH2BP0C7U1 165 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 BCL2P10415 239 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 IGSF11Q5DX21 431 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 OR4X2Q8NGF9 303 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 HINT1P49773 126 aaPredicted RBP13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 FXYD3Q14802 87 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 DNLZQ5SXM8 178 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM159AQ6UWV7 190 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 ERASQ7Z444 233 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 ISOC2Q96AB3 205 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 MT-ND6P03923 174 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
NUCKS1-201ENST00000367142 C7orf77A4D0Y5 90 aa13.52□□□□□ -0.24
NUCKS1-201ENST00000367142 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.24
NUCKS1-201ENST00000367142 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.24
NUCKS1-201ENST00000367142 FAM3BP58499 235 aaPredicted RBP13.52□□□□□ -0.24
NUCKS1-201ENST00000367142 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.24
NUCKS1-201ENST00000367142 GDF9O60383 454 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 FSTP19883 344 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 LINC01560Q8TB33 94 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 A1L4Q6 167 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 OR4A47Q6IF82 309 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 OR4C13Q8NGP0 309 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 ST6GAL2Q96JF0 529 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
NUCKS1-201ENST00000367142 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 KLF14Q8TD94 323 aaPredicted RBP13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 RHOVQ96L33 236 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 YAE1D1Q9NRH1 226 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 TRGV3P03979 118 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 FOXL2P58012 376 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 HIST1H1AQ02539 215 aaPredicted RBP13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 SLC25A47Q6Q0C1 308 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 PQLC2Q6ZP29 291 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 MOSPD3O75425 235 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 COX6A1P12074 109 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF418Q8TF45 676 aaPredicted RBP13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 TMEM45BQ96B21 275 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 EFNB2P52799 333 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 CD81P60033 236 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 CD1AP06126 327 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 COX5BP10606 129 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 ZNF25P17030 456 aaPredicted RBP13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 OR13C6PQ8NH95 151 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 PGLYRP4Q96LB8 373 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 TMEM222Q9H0R3 208 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 DNAJC4Q9NNZ3 241 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 KLHDC2Q9Y2U9 406 aa13.51□□□□□ -0.25
NUCKS1-201ENST00000367142 ISG15P05161 165 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 SCTP09683 121 aa13.5□□□□□ -0.25
NUCKS1-201ENST00000367142 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms