RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC25A28Q96A46 364 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 IGLV3-32A0A0A0MS00 114 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 M0R2Z0 102 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 RAB29O14966 203 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 PTGDSP41222 190 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 RIGQ13278 110 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 ASPHD2Q6ICH7 369 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 KLK2P20151 261 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 ASCL5Q7RTU5 278 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 LRTM2Q8N967 370 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM54Q969K7 222 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 APCSP02743 223 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 PMCHL1Q16048 86 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 MALRD1Q5VYJ5 2156 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 DEFB108AA8MXU0 73 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 PGLYRP1O75594 196 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 A0A1B0GW64 132 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR2M7Q8NG81 312 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 SRSF4Q08170 494 aaKnown RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR52M1Q8NGK5 317 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 LMX1BO60663 402 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 REC114Q7Z4M0 266 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 RTBDNQ9BSG5 229 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 UQCR10Q9UDW1 63 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 PTTG1IPP53801 180 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 TNFAIP6P98066 277 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 PSG5Q15238 335 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 C2orf68Q2NKX9 166 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 CXorf67Q86X51 503 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 CDC42EP3Q9UKI2 254 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 H0YL77 283 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 ACAA1P09110 424 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 WDFY1Q8IWB7 410 aa10.17□□□□□ -0.78
CDC42BPA-202ENST00000366764 MT-CO3P00414 261 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 BMI1P35226 326 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 HIST3H3Q16695 136 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 MEGF10Q96KG7 1140 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 IGHV1-45A0A0A0MS14 117 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 P01737 135 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 IL11P20809 199 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 CYP2G1PQ6ZSU1 146 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 ADAMTS9Q9P2N4 1935 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 CCL2P13500 99 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 COTL1Q14019 142 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 SMPD2O60906 423 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 G6PCP35575 357 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF880Q6PDB4 577 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 FAM89BQ8N5H3 189 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 RCC1LQ96I51 464 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 CXorf66Q5JRM2 361 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 FAM216AQ8WUB2 273 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 MGST3O14880 152 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 FAM157CP0CG43 387 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 SSMEM1Q8WWF3 244 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 DDA1Q9BW61 102 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 SRD5A3Q9H8P0 318 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 IER3P46695 156 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 COMPP49747 757 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 BIVMQ86UB2 503 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR4C12Q96R67 309 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 MRPL13Q9BYD1 178 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 LINC00470Q9BZP3 86 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM56-RWDD3S4R434 201 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR4P4Q8NGL7 312 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 UBALD1Q8TB05 177 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
CDC42BPA-202ENST00000366764 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 LYZL6O75951 148 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 CTSSP25774 331 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 DNASE2BQ8WZ79 361 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM230Q96A57 120 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 FBXO17Q96EF6 278 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF729A6NN14 1252 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 A8MWL6 223 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 AGAP20933 346 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 WFDC8Q8IUA0 241 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR1K1Q8NGR3 316 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 SH3BGRL3Q9H299 93 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 ACP1P24666 158 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 PPP1CCP36873 323 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 CEACAM3P40198 252 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 GSN-AS1Q9NRJ2 163 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 PLA2G3Q9NZ20 509 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 SCTP09683 121 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 GCSAMQ8N6F7 178 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 SPRY3O43610 288 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 UBE2CO00762 179 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 BHLHA15Q7RTS1 189 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPA-202ENST00000366764 ABHD14AQ9BUJ0 271 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms