RNA–Protein interactions for RNA: ENST00000366687.5

CCSAP-203, Transcript of centriole, cilia and spindle associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSAP, Length 5,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-203ENST00000366687 LOC390937A0A1W2PQ73 354 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 ZNHIT1O43257 154 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 UBE2V2Q15819 145 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 CHAC2Q8WUX2 184 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 HILPDAQ9Y5L2 63 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 SNRNP200O75643 2136 aaKnown RBP17.43■□□□□ 0.38
CCSAP-203ENST00000366687 J3KRW8 73 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 PTGDSP41222 190 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 SLC16A13Q7RTY0 426 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 SGMS2Q8NHU3 365 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 MAP1LC3CQ9BXW4 147 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 RPL7P18124 248 aaKnown RBP17.43■□□□□ 0.38
CCSAP-203ENST00000366687 UNC119Q13432 240 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 VWA1Q6PCB0 445 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 APCDD1LQ8NCL9 501 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 RGP1Q92546 391 aaPredicted RBP17.43■□□□□ 0.38
CCSAP-203ENST00000366687 RAB24Q969Q5 203 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 POM121Q96HA1 1249 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 AURKAIP1Q9NWT8 199 aaPredicted RBP17.43■□□□□ 0.38
CCSAP-203ENST00000366687 TMEM229AB2RXF0 380 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 ZNF735P0CB33 412 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 HIST1H1BP16401 226 aaKnown RBP17.43■□□□□ 0.38
CCSAP-203ENST00000366687 CYB561D1Q8N8Q1 229 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 OR4A5Q8NH83 315 aa17.43■□□□□ 0.38
CCSAP-203ENST00000366687 SPTBN1Q01082 2364 aaKnown RBP17.42■□□□□ 0.38
CCSAP-203ENST00000366687 LINC00869P0C866 280 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 FAM106CPP0CH98 169 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 LYRM7Q5U5X0 104 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 SFXN3Q9BWM7 321 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 IGHV3-72A0A0B4J1Y9 119 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 TMEM14DPA8MWL7 114 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 KCNAB3O43448 404 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 ID1P41134 155 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 LAIR2Q6ISS4 152 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 DYNLRB2Q8TF09 96 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 HTN1P15515 57 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 C19orf57Q0VDD7 668 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 ZNF660Q6AZW8 331 aaPredicted RBP17.42■□□□□ 0.38
CCSAP-203ENST00000366687 PQLC2Q6ZP29 291 aa17.42■□□□□ 0.38
CCSAP-203ENST00000366687 ZNF552Q9H707 407 aaPredicted RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 GP6Q9HCN6 339 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 LRRC37AA6NMS7 1700 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 A8MWL6 223 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 PTBP3O95758 552 aaKnown RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 MEF2BQ02080 365 aaPredicted RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 Q6ZN92 141 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 GBGT1Q8N5D6 347 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 GPR146Q96CH1 333 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 SDK2Q58EX2 2172 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 KIF13BQ9NQT8 1826 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 HERVK_113P61574 105 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 WDFY1Q8IWB7 410 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 FAM216AQ8WUB2 273 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 TAF15Q92804 592 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 IDI2-AS1Q9NZ38 188 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 RNF115Q9Y4L5 304 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 SCN4AP35499 1836 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 MUC1P15941 1255 aaPredicted RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 MFAP2P55001 183 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 HSPE1P61604 102 aaKnown RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 SOSTQ9BQB4 213 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 METTL1Q9UBP6 276 aaKnown RBP17.41■□□□□ 0.38
CCSAP-203ENST00000366687 JPT1Q9UK76 154 aa17.41■□□□□ 0.38
CCSAP-203ENST00000366687 CASP8AP2Q9UKL3 1982 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 COMPP49747 757 aaPredicted RBP17.4■□□□□ 0.38
CCSAP-203ENST00000366687 LOXL3P58215 753 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 OVCH2Q7RTZ1 564 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 AQP10Q96PS8 301 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 DOPEY2Q9Y3R5 2298 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 KLF4O43474 513 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 APCSP02743 223 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 SMIM6P0DI80 62 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 TMEM30BQ3MIR4 351 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 LINC00470Q9BZP3 86 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 TMSB15BA0A087X1C1 80 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 TIMP4Q99727 224 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 RBKSQ9H477 322 aa17.4■□□□□ 0.38
CCSAP-203ENST00000366687 FAM3BP58499 235 aaPredicted RBP17.4■□□□□ 0.38
CCSAP-203ENST00000366687 ESPL1Q14674 2120 aa17.39■□□□□ 0.38
CCSAP-203ENST00000366687 C1QL1O75973 258 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 CEBPDP49716 269 aaPredicted RBP17.39■□□□□ 0.37
CCSAP-203ENST00000366687 SPANXN1Q5VSR9 72 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 DLL1O00548 723 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 ZNF883P0CG24 379 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 ZNF658BQ4V348 819 aaPredicted RBP17.39■□□□□ 0.37
CCSAP-203ENST00000366687 SCGB1D4Q6XE38 83 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 TMEM54Q969K7 222 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 C5orf66Q9H5L9 145 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 MYOFQ9NZM1 2061 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 SYNGR3O43761 229 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 HSPB1P04792 205 aaKnown RBP17.39■□□□□ 0.37
CCSAP-203ENST00000366687 HOXA4Q00056 320 aaPredicted RBP17.39■□□□□ 0.37
CCSAP-203ENST00000366687 ATP1A1-AS1Q5TC04 95 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 HCP5Q6MZN7 132 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 MRPL37Q9BZE1 423 aaKnown RBP17.39■□□□□ 0.37
CCSAP-203ENST00000366687 HSPB8Q9UJY1 196 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 NPIPB9F8W1W9 429 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 WFDC3Q8IUB2 231 aa17.39■□□□□ 0.37
CCSAP-203ENST00000366687 PIKFYVEQ9Y2I7 2098 aa17.38■□□□□ 0.37
CCSAP-203ENST00000366687 IGKV3D-11A0A0A0MRZ8 115 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms