RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 H0YJW9 148 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 H3BNX3 289 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 AIPO00170 330 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 GYG2O15488 501 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR7C1O76099 320 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 FADS2O95864 444 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 CSTBP04080 98 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 FOLR2P14207 255 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 VAMP1P23763 118 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 CRISP1P54107 249 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RBM11P57052 281 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 PJVKQ0ZLH3 352 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 PTGES3Q15185 160 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 PSG5Q15238 335 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RPEL1Q2QD12 228 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 MOGAT2Q3SYC2 334 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 DNAL1Q4LDG9 190 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RPL39P5Q59GN2 51 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 SYT6Q5T7P8 510 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM244Q5VVB8 128 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 NXNL2Q5VZ03 156 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 STEAP3Q658P3 488 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 Q6ZWC4 215 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 SLC51BQ86UW2 128 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM61Q8N0U2 210 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF645Q8N7E2 425 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR10H4Q8NGA5 316 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR13C3Q8NGS6 347 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 TNFAIP8L1Q8WVP5 186 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 TRIM63Q969Q1 353 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RNF183Q96D59 192 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 IL4I1Q96RQ9 567 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 UQCC2Q9BRT2 126 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 ABHD14AQ9BUJ0 271 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 MRPS26Q9BYN8 205 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RCC2Q9P258 522 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 METTL1Q9UBP6 276 aaKnown RBP6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 FBXL17Q9UF56 701 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 RNF150Q9ULK6 438 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 DHDHQ9UQ10 334 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 ST3GAL6Q9Y274 331 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 SULT1B1O43704 296 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 S1PR2O95136 353 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 CST1P01037 141 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 OCM2P0CE71 109 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 OCMP0CE72 109 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 APELAP0DMC3 54 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 FCGR2BP31994 310 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 GK3PQ14409 553 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 FXYD3Q14802 87 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 PLGLAQ15195 96 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 RSU1Q15404 277 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 MRGPRG-AS1Q2M3A8 158 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 RGS21Q2M5E4 152 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 NHLRC3Q5JS37 347 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF529Q6P280 563 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 GAPTQ8N292 157 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM163Q8TC26 289 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 CCDC124Q96CT7 223 aaKnown RBP6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 SLC7A6OSQ96CW6 309 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 ASB9Q96DX5 294 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 THTPAQ9BU02 230 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR2S2Q9NQN1 319 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 MLXQ9UH92 298 aa6.25□□□□□ -1.41
HMGB1P39-201ENST00000366304 A0A0G2JLM5 398 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 PPP5D1E7EU14 171 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 H3BUA1 57 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 M0R2N4 97 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 SPINT2O43291 252 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 AIREO43918 545 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 PROP1O75360 226 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 SCAF4O95104 1147 aaKnown RBP6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 PRH1P02810 166 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 IGKV1-16P04430 117 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 S100A6P06703 90 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR2T7P0C7T2 308 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 DAPP51397 102 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 TATDN3Q17R31 274 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 TM4SF20Q53R12 229 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 ATAD3CQ5T2N8 411 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 C12orf73Q69YU5 71 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 LINC00299Q6ZSB3 139 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 DHFR2Q86XF0 187 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 ADGRG5Q8IZF4 528 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR52N1Q8NH53 320 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 KCNG3Q8TAE7 436 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 DYNLRB2Q8TF09 96 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 TAF9BQ9HBM6 251 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 PEMTQ9UBM1 199 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 RSL24D1Q9UHA3 163 aaKnown RBP6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF230Q9UIE0 474 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 TRAPPC2LQ9UL33 140 aa6.24□□□□□ -1.41
HMGB1P39-201ENST00000366304 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 FAM90A23PA8MXZ1 464 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 IGLL5B9A064 214 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 DEFB4AO15263 64 aa6.23□□□□□ -1.41
HMGB1P39-201ENST00000366304 MAGEB3O15480 346 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms