RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CRPP02741 224 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 CCNOP22674 350 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 CDK9P50750 372 aaKnown RBP0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 PLCZ1Q86YW0 608 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR51T1Q8NGJ9 327 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR5K1Q8NHB7 308 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 RPS4Y2Q8TD47 263 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 TAMM41Q96BW9 452 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 C8orf4Q9NR00 106 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 UBE2L6O14933 153 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 CD7P09564 240 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 RAB31Q13636 194 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 CDK5R1Q15078 307 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 SURF2Q15527 256 aaPredicted RBP0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 C18orf21Q32NC0 220 aaPredicted RBP0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 TTC33Q6PID6 262 aaPredicted RBP0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 FP248Q71RG6 208 aaPredicted RBP0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 LRRC6Q86X45 466 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 C15orf53Q8NAA6 179 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 RAB1BQ9H0U4 201 aa0.6□□□□□ -2.31
RNU4-28P-201ENST00000364739 REREQ9P2R6 1566 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 A0A1B0GX12 115 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 ASS1P00966 412 aaKnown RBP0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 PSMD7P51665 324 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 TAS2R45P59539 299 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 FLOT2Q14254 428 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 TBC1D28Q2M2D7 210 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 TMEM42Q69YG0 159 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR10K2Q6IF99 312 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 AMTNQ6UX39 209 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 MRPL52Q86TS9 123 aaKnown RBP0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 CNPY4Q8N129 248 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 CIDECQ96AQ7 238 aaPredicted RBP0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 ZNF514Q96K75 400 aaPredicted RBP0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 SLC2A9Q9NRM0 540 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 ENPP5Q9UJA9 477 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 C22orf24Q9Y442 160 aa0.59□□□□□ -2.31
RNU4-28P-201ENST00000364739 GREB1Q4ZG55 1949 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 BHLHE40O14503 412 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 PSMG1O95456 288 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 IGLV3-27P01718 113 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 ADORA1P30542 326 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 TNNC1P63316 161 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 LGALS9BQ3B8N2 356 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 CLDND2Q8NHS1 167 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 VCX3BQ9H321 246 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 SIPA1L1O43166 1804 aa0.58□□□□□ -2.32
RNU4-28P-201ENST00000364739 IGKV2D-26A0A0A0MRZ7 120 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 LDOC1O95751 146 aaPredicted RBP0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 CCR2P41597 374 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 AKR1C3P42330 323 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 CTBP2P56545 445 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 TAS2R30P59541 319 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 C1DQ13901 141 aaKnown RBP0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 MESTQ5EB52 335 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 SPATA12Q7Z6I5 190 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 PACRGLQ8N7B6 248 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 TNFAIP8L1Q8WVP5 186 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 ACY3Q96HD9 319 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 ODF3Q96PU9 254 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 ADAT1Q9BUB4 502 aaKnown RBP0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 CST9LQ9H4G1 147 aa0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 MRM2Q9UI43 246 aaKnown RBP0.57□□□□□ -2.32
RNU4-28P-201ENST00000364739 MED12LQ86YW9 2145 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 SGCEO43556 437 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 IL9P15248 144 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 HSPA9P38646 679 aaKnown RBP0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 STC1P52823 247 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 KTN1-AS1Q86SY8 53 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 TMEM239Q8WW34 195 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 CCDC127Q96BQ5 260 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 NRBP2Q9NSY0 501 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 COMMD9Q9P000 198 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 SNX10Q9Y5X0 201 aa0.56□□□□□ -2.32
RNU4-28P-201ENST00000364739 LAMB4A4D0S4 1761 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 IGHV3-64A0A075B6Q5 118 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 TXNDC9O14530 226 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 PLA2G10O15496 165 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 MRPS14O60783 128 aaKnown RBP0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 CIAO1O76071 339 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 CST4P01036 141 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 UCHL1P09936 223 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 LIMS3P0CW19 117 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 LIMS4P0CW20 117 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 DEFA4P12838 97 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 CD24P25063 80 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 CCR7P32248 378 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 AQP4P55087 323 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 DAND5Q8N907 189 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 LRRC20Q8TCA0 184 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 SMCR5Q8TEV8 140 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 TMEM56Q96MV1 263 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 FAM210AQ96ND0 272 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 TTTY13Q9BZ97 58 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 HEATR5AQ86XA9 2040 aa0.55□□□□□ -2.32
RNU4-28P-201ENST00000364739 IGKV1-9A0A0C4DH69 117 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 MRASO14807 208 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 HCRTO43612 131 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 OR10J1P30954 320 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms