RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 DNMT1P26358 1616 aaKnown RBP-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 LRP2P98164 4655 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 CD79BP40259 229 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 TAS2R45P59539 299 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 PAFAH1B3Q15102 231 aaKnown RBP-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 SCGB1D4Q6XE38 83 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 DOLPP1Q86YN1 238 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 SPICQ8N5J4 248 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 OR4K17Q8NGC6 315 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 GLYATL2Q8WU03 294 aa-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 UBR5O95071 2799 aaPredicted RBP-1.18□□□□□ -2.6
RNU4-40P-201ENST00000364351 SUPT3HB4E1H0 165 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 C19orf84I3L1E1 186 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 EPPINO95925 133 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 NPYP01303 97 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 CD7P09564 240 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 CDK2P24941 298 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 SULT1A2P50226 295 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 COMMD1Q8N668 190 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 FBXO36Q8NEA4 188 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 RPS4Y2Q8TD47 263 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 CDKL2Q92772 493 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 BDP1A6H8Y1 2624 aa-1.19□□□□□ -2.6
RNU4-40P-201ENST00000364351 ZNF106Q9H2Y7 1883 aaKnown RBP-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 HMCN2Q8NDA2 5059 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 DEFA4P12838 97 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 AKR1C4P17516 323 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 MTERF4Q7Z6M4 381 aaKnown RBP-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 OR51L1Q8NGJ5 315 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 SERPINI1Q99574 410 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 EXO5Q9H790 373 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 SLC2A9Q9NRM0 540 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 TIMM9Q9Y5J7 89 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 V9GYY9 64 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 SMARCA4P51532 1647 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 AQRO60306 1485 aaKnown RBP eCLIP-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 HERC1Q15751 4861 aa-1.2□□□□□ -2.6
RNU4-40P-201ENST00000364351 DOPEY1Q5JWR5 2465 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 LOC110117498A0A087WWA1 95 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 RFXANKO14593 260 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 OR13C7P0DN81 318 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 EMP1P54849 157 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 SPINK7P58062 85 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 DSTNP60981 165 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 TRMT12Q53H54 448 aaKnown RBP-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 ARL6IP6Q8N6S5 226 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 OR4C6Q8NH72 309 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 PATE1Q8WXA2 126 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 TMA16Q96EY4 203 aaKnown RBP-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 VAPAQ9P0L0 249 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 RHBDD3Q9Y3P4 386 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 KPTNQ9Y664 436 aa-1.21□□□□□ -2.6
RNU4-40P-201ENST00000364351 MED12LQ86YW9 2145 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 UBDO15205 165 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 GMDSO60547 372 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 PSMG1O95456 288 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 PSMB3P49720 205 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 STC1P52823 247 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 SPINK6Q6UWN8 80 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 TMEM86AQ8N2M4 240 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 CCDC112Q8NEF3 446 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 OR2AE1Q8NHA4 323 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 TMEM70Q9BUB7 260 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 UBQLN4Q9NRR5 601 aa-1.22□□□□□ -2.6
RNU4-40P-201ENST00000364351 ITGB1BP1O14713 200 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 STK16O75716 305 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 CCNOP22674 350 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 GADD45AP24522 165 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 ETV1P50549 477 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 C1QTNF8P60827 252 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 DYNLL1P63167 89 aaKnown RBP-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 GNA12Q03113 381 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 ASB13Q8WXK3 278 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 ABHD14BQ96IU4 210 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 CREBBPQ92793 2442 aa-1.23□□□□□ -2.61
RNU4-40P-201ENST00000364351 ALPK3Q96L96 1907 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 SYNJ2BP-COX16A0A087WUM0 186 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 A0A0D9SG42 100 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 CTAGE15A4D2H0 777 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 IBA57-AS1B1ANH7 110 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 H7C2G1 150 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 NDUFB2O95178 105 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 OR1E2P47887 323 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 RBM11P57052 281 aaKnown RBP-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 TPI1P60174 286 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 TBC1D28Q2M2D7 210 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 HBMQ6B0K9 141 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 CTAGE6Q86UF2 777 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 BLZF1Q9H2G9 400 aa-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 SCAF11Q99590 1463 aaKnown RBP-1.24□□□□□ -2.61
RNU4-40P-201ENST00000364351 ZANQ9Y493 2812 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 IGF2RP11717 2491 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 MEIS3P1A6NDR6 274 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 OR2T1O43869 369 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 TRGC1P0CF51 173 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 ARHGAP18Q8N392 663 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 TMEM75Q8N9X5 138 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 AQP3Q92482 292 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 SYNRGQ9UMZ2 1314 aa-1.25□□□□□ -2.61
RNU4-40P-201ENST00000364351 REREQ9P2R6 1566 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms