RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TMEM11P17152 192 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 MPZP25189 248 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 RHOBP62745 196 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 CFHR1Q03591 330 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 ELOBQ15370 118 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 SLC23A3Q6PIS1 610 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 HEPN1Q6WQI6 88 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 MDP1Q86V88 176 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 HES7Q9BYE0 225 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 DYNLRB1Q9NP97 96 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 ABCA4P78363 2273 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 PRR19A6NJB7 356 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 TNFSF15O95150 251 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 OR2H2O95918 312 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 UCP3P55916 312 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 QRFPP83859 136 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 ICAM4Q14773 271 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 DHRS13Q6UX07 377 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 CORO2AQ92828 525 aa11.9□□□□□ -0.5
COL6A1-201ENST00000361866 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 IGKV1D-12P01611 117 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 COL10A1Q03692 680 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 REC114Q7Z4M0 266 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 LURAP1LQ8IV03 231 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 GLRX2Q9NS18 164 aa11.9□□□□□ -0.51
COL6A1-201ENST00000361866 AGAP20933 346 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 C10orf128Q5T292 105 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 C1orf210Q8IVY1 113 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 CT55Q8WUE5 264 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 CHEK1O14757 476 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 RHBDL1O75783 438 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 CD1BP29016 333 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 GNB1P62873 340 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
COL6A1-201ENST00000361866 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 STARD4Q96DR4 205 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 DEFA4P12838 97 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 OR10J1P30954 320 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 KLHDC1Q8N7A1 406 aa11.89□□□□□ -0.51
COL6A1-201ENST00000361866 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-201ENST00000361866 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
COL6A1-201ENST00000361866 DOPEY2Q9Y3R5 2298 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 COX7A2P2O60397 106 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
COL6A1-201ENST00000361866 MIC13Q5XKP0 118 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 IGHV1-45A0A0A0MS14 117 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
COL6A1-201ENST00000361866 ZNF83P51522 516 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
COL6A1-201ENST00000361866 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
COL6A1-201ENST00000361866 PCOLCEQ15113 449 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 VSIRQ9H7M9 311 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 FOXD3Q9UJU5 478 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-201ENST00000361866 hCG_38984A0A1B0GV85 526 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 E9PLN8 166 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 SYNGR3O43761 229 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 UCP1P25874 307 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 TRAT1Q6PIZ9 186 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
COL6A1-201ENST00000361866 WIPF3A6NGB9 483 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 CD55P08174 381 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SOD3P08294 240 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SSPNQ14714 243 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 RPEL1Q2QD12 228 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 OR10X1Q8NGY0 326 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 POM121L2Q96KW2 1035 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 A0A0G2JMM0 328 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 A0A1W2PPB8 328 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 A0A1W2PRS3 328 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 KIR3DP1A8MWS1 328 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 KBTBD11O94819 623 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 HBZP02008 142 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 TNFRSF9Q07011 255 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 RTL8BQ17RB0 113 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 DRAM1Q8N682 238 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 S1PR2O95136 353 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 STUMQ69YW2 141 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 OR4X1Q8NH49 305 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 TMEM171Q8WVE6 324 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SH2D2AQ9NP31 389 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SMIM15Q7Z3B0 74 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 OR51G1Q8NGK1 321 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 ZNF596Q8TC21 504 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
COL6A1-201ENST00000361866 NOL4LQ96MY1 436 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
COL6A1-201ENST00000361866 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms