RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 TMEM211Q6ICI0 200 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 RNASEH2CQ8TDP1 164 aaKnown RBP13.69□□□□□ -0.22
IFT140-201ENST00000361339 ATP5SQ99766 215 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 ZPBPQ9BS86 351 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 SLC22A20A6NK97 555 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 M0R296 226 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 FGF12P61328 243 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 SELENOHQ8IZQ5 122 aaKnown RBP13.69□□□□□ -0.22
IFT140-201ENST00000361339 LINC00470Q9BZP3 86 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 TMEM222Q9H0R3 208 aa13.69□□□□□ -0.22
IFT140-201ENST00000361339 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 ZNF737O75373 536 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 TFF1P04155 84 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 RPLP1P05386 114 aaKnown RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 PFN1P07737 140 aaKnown RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 TMEM241Q24JQ0 296 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 MDP1Q86V88 176 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 APOBEC3DQ96AK3 386 aaPredicted RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 NAPSAO96009 420 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 MCEMP1Q8IX19 187 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 LHX4Q969G2 390 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 MS4A10Q96PG2 267 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 A0A0G2JRQ6 117 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 TRAPPC2LH3BP13 241 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 ZNF16P17020 682 aaPredicted RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 LRTM2Q8N967 370 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 IL1F10Q8WWZ1 152 aa13.68□□□□□ -0.22
IFT140-201ENST00000361339 RIMS4Q9H426 269 aaPredicted RBP13.68□□□□□ -0.22
IFT140-201ENST00000361339 TRAV24A0A0B4J272 114 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 HPRT1P00492 218 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 HNF1AP20823 631 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 WDR86Q86TI4 376 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 OR51G1Q8NGK1 321 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 PARD6AQ9NPB6 346 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 CISD1Q9NZ45 108 aaKnown RBP13.67□□□□□ -0.22
IFT140-201ENST00000361339 MAP1LC3B2A6NCE7 125 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 CDS2O95674 445 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 MDS2Q8NDY4 140 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 OR4F5Q8NH21 305 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 OR4F4Q96R69 305 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 MAP1LC3BQ9GZQ8 125 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 OR1A1Q9P1Q5 309 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 VAX2Q9UIW0 290 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 NAGKQ9UJ70 344 aa13.67□□□□□ -0.22
IFT140-201ENST00000361339 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 SS18L1O75177 396 aaPredicted RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 ARL16Q0P5N6 197 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 OR5P3Q8WZ94 311 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 SLC39A9Q9NUM3 307 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 MAP1BP46821 2468 aaKnown RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 CACNA1DQ01668 2161 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 CEBPDP49716 269 aaPredicted RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 PAX9P55771 341 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 H1FOOQ8IZA3 346 aaPredicted RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 PLPPR1Q8TBJ4 325 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
IFT140-201ENST00000361339 SPIN2AQ99865 258 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 SPIN2BQ9BPZ2 258 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 C11orf1Q9H5F2 150 aa13.66□□□□□ -0.22
IFT140-201ENST00000361339 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 RAB4AP20338 218 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 PLA2G2CQ5R387 149 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 PCSK4Q6UW60 755 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 MKXQ8IYA7 352 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 Q8NFD4 153 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 OR51I2Q9H344 312 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
IFT140-201ENST00000361339 ABI3Q9P2A4 366 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 TNRC6AQ8NDV7 1962 aaKnown RBP13.65□□□□□ -0.22
IFT140-201ENST00000361339 C21orf140B9A014 251 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 LYZL6O75951 148 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 OR2T10Q8NGZ9 312 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 NAT8Q9UHE5 227 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 SIRPB1O00241 398 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 GCH1P30793 250 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 TNFSF10P50591 281 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 PLP2Q04941 152 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 CXorf67Q86X51 503 aaPredicted RBP13.65□□□□□ -0.22
IFT140-201ENST00000361339 OR8G5Q8NG78 346 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 TMEM242Q9NWH2 141 aa13.65□□□□□ -0.22
IFT140-201ENST00000361339 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
IFT140-201ENST00000361339 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
IFT140-201ENST00000361339 RPP30P78346 268 aaKnown RBP13.64□□□□□ -0.23
IFT140-201ENST00000361339 NRN1LQ496H8 165 aa13.64□□□□□ -0.23
IFT140-201ENST00000361339 OR2J1Q9GZK6 312 aa13.64□□□□□ -0.23
IFT140-201ENST00000361339 PARLQ9H300 379 aa13.64□□□□□ -0.23
IFT140-201ENST00000361339 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms