RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 INO80CQ6PI98 192 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 WDR34Q96EX3 536 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 WNT16Q9UBV4 365 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 MPTX1A8MV57 137 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 CCL7P80098 99 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 KCNE1BA0A087WTH5 132 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 IGHV4-34P06331 123 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 C14orf144Q96I85 54 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 TRAV39A0A0B4J263 110 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 RNF122Q9H9V4 155 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 AGAP20933 346 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 C19orf24Q9BVV8 132 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 COX6B1P14854 86 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 CACNG7P62955 275 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 DMKNQ6E0U4 476 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 AMER3Q8N944 861 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 FAM222BQ8WU58 562 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 SMOC1Q9H4F8 434 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 TMEM250H0YL14 139 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 LOXL3P58215 753 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 WIPI1Q5MNZ9 446 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 SIGMAR1Q99720 223 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 PAXXQ9BUH6 204 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 TET1Q8NFU7 2136 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 PF4V1P10720 104 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 GLIPR1P48060 266 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 MGAT2Q10469 447 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 FRRS1LQ9P0K9 344 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 DLEC1Q9Y238 1755 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 LINC00587B1AMM8 73 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 H0YL77 283 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 HYPMO75409 117 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 KLKB1P03952 638 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 TINAGQ9UJW2 476 aa11.55□□□□□ -0.56
SRGAP3-201ENST00000360413 LIPFP07098 398 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF658BQ4V348 819 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 DCAF12L2Q5VW00 463 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 PGLYRP4Q96LB8 373 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 SBF1O95248 1867 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 FAM157AC9JC47 383 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 FCGR3AP08637 254 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 CKS1BP61024 79 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 TRIP6Q15654 476 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 H3BRM9 83 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 SLC17A3O00476 420 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 GALNSP34059 522 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF774Q6NX45 483 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 WNT10AQ9GZT5 417 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF430Q9H8G1 570 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 PGPEP1Q9NXJ5 209 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 GAPDHP04406 335 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 B4GALNT1Q00973 533 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 NEU1Q99519 415 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 SOSTQ9BQB4 213 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 SPCS1Q9Y6A9 102 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
SRGAP3-201ENST00000360413 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 SPTY2D1-AS1A0A0U1RR47 76 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 TMEM45BQ96B21 275 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF32P17041 273 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 RUNX1Q01196 453 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 IFITM2Q01629 132 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 OR5A1Q8NGJ0 315 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 TCF23Q7RTU1 214 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 OGG1O15527 345 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 GBF1Q92538 1859 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 C16orf97H3BN30 126 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 MMDQ15546 238 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 ECSCRQ19T08 205 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 ALX4Q9H161 411 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-201ENST00000360413 C1QL1O75973 258 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 IFITM3Q01628 133 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF117Q03924 483 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 WFDC5Q8TCV5 224 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms