RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CNOT4O95628 575 aaKnown RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 IFNA5P01569 189 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 IGKV1-5P01602 117 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 MMP7P09237 267 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 FGF6P10767 208 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 DUTP33316 252 aaKnown RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 GNB1P62873 340 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF616Q08AN1 781 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 OCIAD2Q56VL3 154 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 FAM90A1Q86YD7 464 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 Q8IYB0 196 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 CPEB3Q8NE35 698 aaKnown RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 CLDN23Q96B33 292 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 FOXN4Q96NZ1 517 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 ALKBH7Q9BT30 221 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-201ENST00000359785 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 DUSP23Q9BVJ7 150 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 FOXQ1Q9C009 403 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 PRSS22Q9GZN4 317 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 IGFLR1Q9H665 355 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 OR2W1Q9Y3N9 320 aa3.79□□□□□ -1.8
PTPN22-201ENST00000359785 MEIS3P1A6NDR6 274 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 GLOD5A6NK44 160 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 SHISA7A6NL88 538 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 H3BRM9 83 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 FSTL3O95633 263 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 AMY1AP04745 511 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 SELEP16581 610 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF41P51814 821 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-201ENST00000359785 RBPJQ06330 500 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF146Q15072 292 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 C3orf36Q3SXR2 165 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ALKBH2Q6NS38 261 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF497Q6ZNH5 498 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 RTN4RL2Q86UN3 420 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 STPG4Q8N801 248 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 CD300LFQ8TDQ1 290 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 NDFIP1Q9BT67 221 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 NPCDR1Q9BY65 106 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZMAT4Q9H898 229 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 PRKAB1Q9Y478 270 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 IGKV1-12A0A0C4DH73 117 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 A0A1W2PS18 150 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 IZUMO1RA6ND01 250 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 E9PLN8 166 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 SIAH2O43255 324 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 CLDN14O95500 239 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 CXorf1O96002 111 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 IGKV1D-12P01611 117 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 HNF1AP20823 631 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 BLVRBP30043 206 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-201ENST00000359785 KIR2DS2P43631 304 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 OR1D4P47884 311 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 S100A10P60903 97 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 HIST1H1AQ02539 215 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-201ENST00000359785 POU3F1Q03052 451 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF818PQ6ZRF7 136 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 C8orf31Q8N9H6 132 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF596Q8TC21 504 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 DTD1Q8TEA8 209 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 TBX15Q96SF7 602 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 MRPL32Q9BYC8 188 aaKnown RBP3.78□□□□□ -1.8
PTPN22-201ENST00000359785 CBLN4Q9NTU7 201 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 DEC1Q9P2X7 70 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 WNT16Q9UBV4 365 aa3.78□□□□□ -1.8
PTPN22-201ENST00000359785 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 TMEM238C9JI98 176 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 CD55P08174 381 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 COX5AP20674 150 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 GCH1P30793 250 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 VDAC2P45880 294 aaPredicted RBP3.77□□□□□ -1.81
PTPN22-201ENST00000359785 GPR6P46095 362 aaPredicted RBP3.77□□□□□ -1.81
PTPN22-201ENST00000359785 GNG10P50151 68 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 METAP1P53582 386 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 ARL16Q0P5N6 197 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 ATXN7L3Q14CW9 347 aaPredicted RBP3.77□□□□□ -1.81
PTPN22-201ENST00000359785 TESK1Q15569 626 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 C5orf64Q2M2E5 130 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 C12orf54Q6X4T0 127 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 OOSP2Q86WS3 158 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 RDH5Q92781 318 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 C1orf159Q96HA4 380 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 SMIM7Q9BQ49 75 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 VN1R1Q9GZP7 353 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 CST9LQ9H4G1 147 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 SRA1Q9HD15 236 aaKnown RBP3.77□□□□□ -1.81
PTPN22-201ENST00000359785 FGF21Q9NSA1 209 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 MRPS17Q9Y2R5 130 aaKnown RBP3.77□□□□□ -1.81
PTPN22-201ENST00000359785 DCDC2BA2VCK2 349 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 FAM24AA6NFZ4 105 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 NPIPA5E9PKD4 350 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 SRFP11831 508 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 HTD2P86397 168 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 DEFB134Q4QY38 66 aa3.77□□□□□ -1.81
PTPN22-201ENST00000359785 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms