RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MPTX1A8MV57 137 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC197-201ENST00000359253 IGHV3-43DP0DP04 118 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 MMP9P14780 707 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 CXCL2P19875 107 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 KRTAP10-9P60411 292 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 RAB32Q13637 225 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 LRRC37A5PQ49AS3 106 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 TCF23Q7RTU1 214 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
CCDC197-201ENST00000359253 MBD6Q96DN6 1003 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
CCDC197-201ENST00000359253 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 PARP12Q9H0J9 701 aaKnown RBP11.12□□□□□ -0.63
CCDC197-201ENST00000359253 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 C19orf12Q9NSK7 152 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 MBD2Q9UBB5 411 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 CACFD1Q9UGQ2 172 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 PRELID3BQ9Y3B1 194 aa11.12□□□□□ -0.63
CCDC197-201ENST00000359253 A0A087X0M5 115 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 A0A1B0GX30 115 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 E5RGE8 158 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 OVOL3O00110 214 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 PPIHO43447 177 aaKnown RBP11.11□□□□□ -0.63
CCDC197-201ENST00000359253 DEDDO75618 318 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 IFNA7P01567 189 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 PVALBP20472 110 aaPredicted RBP11.11□□□□□ -0.63
CCDC197-201ENST00000359253 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
CCDC197-201ENST00000359253 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
CCDC197-201ENST00000359253 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF439Q8NDP4 499 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF596Q8TC21 504 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 DCUN1D4Q92564 292 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 TNFRSF14Q92956 283 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 S1PR3Q99500 378 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 COA4Q9NYJ1 87 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 NSG2Q9Y328 171 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
CCDC197-201ENST00000359253 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
CCDC197-201ENST00000359253 KANTRA0A1W2PQU2 76 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 C17orf98A8MV24 154 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 TAAR5O14804 337 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF16P17020 682 aaPredicted RBP11.1□□□□□ -0.63
CCDC197-201ENST00000359253 DUTP33316 252 aaKnown RBP11.1□□□□□ -0.63
CCDC197-201ENST00000359253 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
CCDC197-201ENST00000359253 THBS3P49746 956 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF273Q14593 569 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 LTC4SQ16873 150 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 KIAA2026Q5HYC2 2103 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 CT45A1Q5HYN5 189 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 GPR157Q5UAW9 335 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 TEX261Q6UWH6 196 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 CT45A3Q8NHU0 189 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
CCDC197-201ENST00000359253 TCTEX1D2Q8WW35 142 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 PATZ1Q9HBE1 687 aaKnown RBP11.1□□□□□ -0.63
CCDC197-201ENST00000359253 MMP24Q9Y5R2 645 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 U3KQ87 197 aa11.1□□□□□ -0.63
CCDC197-201ENST00000359253 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 F5H0A9 414 aaPredicted RBP11.09□□□□□ -0.63
CCDC197-201ENST00000359253 LYNX1G3V0Z9 82 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 H0YIZ8 118 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 HPRT1P00492 218 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 MBPP02686 304 aaPredicted RBP11.09□□□□□ -0.63
CCDC197-201ENST00000359253 LYNX1P0DP58 116 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 OMGP23515 440 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 NFYBP25208 207 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 LPAR6P43657 344 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 GPR6P46095 362 aaPredicted RBP11.09□□□□□ -0.63
CCDC197-201ENST00000359253 P2RY1P47900 373 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 ZNF134P52741 427 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 AKR1C2P52895 323 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 DLX6P56179 175 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 S100A10P60903 97 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 ID3Q02535 119 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 SPAG16Q8N0X2 631 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 HEXA-AS1Q9H8Q6 139 aa11.09□□□□□ -0.63
CCDC197-201ENST00000359253 FBN2P35556 2912 aa11.08□□□□□ -0.63
CCDC197-201ENST00000359253 DSCAML1Q8TD84 2053 aa11.08□□□□□ -0.63
CCDC197-201ENST00000359253 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms