RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 THYN1Q9P016 225 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 IGKV3D-11A0A0A0MRZ8 115 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 MGST3O14880 152 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 HPRT1P00492 218 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 NHLRC2Q8NBF2 726 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 HES7Q9BYE0 225 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 ZMAT5Q9UDW3 170 aaKnown RBP11.8□□□□□ -0.52
VCP-201ENST00000358901 FAM87AP0C7U9 286 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 RNF24Q9Y225 148 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 ATRXP46100 2492 aa11.8□□□□□ -0.52
VCP-201ENST00000358901 TCAPO15273 167 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 P01737 135 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 CADP27708 2225 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 MPV17P39210 176 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
VCP-201ENST00000358901 ASPHD2Q6ICH7 369 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 RBKSQ9H477 322 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 IL19Q9UHD0 177 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 INSIG2Q9Y5U4 225 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 J3QR89 54 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 COX6A1P12074 109 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 MFAP2P55001 183 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 EFNB1P98172 346 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 GOLT1BQ9Y3E0 138 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 OR10J1P30954 320 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 FAM216AQ8WUB2 273 aa11.79□□□□□ -0.52
VCP-201ENST00000358901 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 RAB29O14966 203 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 C10orf113Q5VZT2 155 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 NYNRINQ9P2P1 1898 aaKnown RBP11.78□□□□□ -0.52
VCP-201ENST00000358901 CEACAM3P40198 252 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 PRDM14Q9GZV8 571 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 A0A1B0GTI1 187 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 GNG7O60262 68 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 LYPD3O95274 346 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 CA5BP1Q8WTZ4 195 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 CHRNA10Q9GZZ6 450 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 TMEM191AQ9H0A3 160 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 RPRMQ9NS64 109 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 KCNMB2Q9Y691 235 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 SCN4AP35499 1836 aa11.78□□□□□ -0.52
VCP-201ENST00000358901 J3QRE1 110 aa11.77□□□□□ -0.52
VCP-201ENST00000358901 ZIC3O60481 467 aa11.77□□□□□ -0.52
VCP-201ENST00000358901 CD3EP07766 207 aa11.77□□□□□ -0.52
VCP-201ENST00000358901 UCP3P55916 312 aa11.77□□□□□ -0.52
VCP-201ENST00000358901 CCL13Q99616 98 aa11.77□□□□□ -0.52
VCP-201ENST00000358901 DICER1Q9UPY3 1922 aaKnown RBP11.77□□□□□ -0.52
VCP-201ENST00000358901 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
VCP-201ENST00000358901 FAM209BQ5JX69 171 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 MIC13Q5XKP0 118 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 RAB1CQ92928 201 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 PKIBQ9C010 78 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 LOC390937A0A1W2PQ73 354 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 ZG16O60844 167 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 TNFRSF9Q07011 255 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 M0R296 226 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 MPDU1O75352 247 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 OR2V2Q96R30 315 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 IL17BQ9UHF5 180 aa11.77□□□□□ -0.53
VCP-201ENST00000358901 RFPL3SP0C7P2 107 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 ZNF137PP52743 207 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 CD81P60033 236 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 MARS2Q96GW9 593 aaKnown RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 RTN4RQ9BZR6 473 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 GSX1Q9H4S2 264 aaPredicted RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 STXBP6Q8NFX7 210 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 RASL11BQ9BPW5 248 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 ASCL3Q9NQ33 180 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 DOCK4Q8N1I0 1966 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 MTCL1Q9Y4B5 1905 aaKnown RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 SMPD2O60906 423 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 OR4A8P0C604 315 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 FAM222BQ8WU58 562 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 PERPQ96FX8 193 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms