RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MEF2BQ02080 365 aaPredicted RBP10.14□□□□□ -0.79
COL9A1-202ENST00000357250 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 OR2A7Q96R45 310 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 G6PC2Q9NQR9 355 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 TRPM7Q96QT4 1865 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 A0A087X0M5 115 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 A0A1B0GX30 115 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 OR2H2O95918 312 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 IGHV3-13P01766 116 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 IGHV3-7P01780 117 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 PKIAP61925 76 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 OR1K1Q8NGR3 316 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 APCSP02743 223 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 CELA2AP08217 269 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 STAG3L2P0CL84 134 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 PTGDSP41222 190 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 DGAT2L7PQ6IED9 249 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 Q6ZN92 141 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 NYNRINQ9P2P1 1898 aaKnown RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 MMDQ15546 238 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 JPT1Q9UK76 154 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 PXMP4Q9Y6I8 212 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 BMPR1BO00238 502 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 IL11P20809 199 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 NCMAPQ5T1S8 102 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 FGF11Q92914 225 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 RHOVQ96L33 236 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 PILRBQ9UKJ0 227 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 A0A1W2PR77 199 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 FAM157AC9JC47 383 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 MELTFP08582 738 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 MUC1P15941 1255 aaPredicted RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 HIST1H1BP16401 226 aaKnown RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 LAIR2Q6ISS4 152 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 DYRK2Q92630 601 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 TAF15Q92804 592 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 RSRP1Q9BUV0 290 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 PGLYRP1O75594 196 aaPredicted RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 GCSHP23434 173 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 SUCLG1P53597 346 aaKnown RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 RTP5Q14D33 572 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 LRRC75BQ2VPJ9 315 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF658BQ4V348 819 aaPredicted RBP10.13□□□□□ -0.79
COL9A1-202ENST00000357250 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 TEX29Q8N6K0 151 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 STARD4Q96DR4 205 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 DLL3Q9NYJ7 618 aa10.13□□□□□ -0.79
COL9A1-202ENST00000357250 A6NDN8 102 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 HKR1P10072 659 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 ID1P41134 155 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 IGSF11Q5DX21 431 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM171Q8WVE6 324 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 WASHC3Q9Y3C0 194 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 RALGAPA2Q2PPJ7 1873 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 DLL1O00548 723 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 EFEMP2O95967 443 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 CD8AP01732 235 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 GPR6P46095 362 aaPredicted RBP10.12□□□□□ -0.79
COL9A1-202ENST00000357250 TCL1AP56279 114 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 PCOLCEQ15113 449 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM45BQ96B21 275 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 VWA8A3KMH1 1905 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 COX6A1P12074 109 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 GAMTQ14353 236 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 KCNMB1Q16558 191 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 GBGT1Q8N5D6 347 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 CYB561D1Q8N8Q1 229 aa10.12□□□□□ -0.79
COL9A1-202ENST00000357250 ODAMA1E959 279 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 IER3P46695 156 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 HSPE1P61604 102 aaKnown RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 IZUMO4Q1ZYL8 232 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF880Q6PDB4 577 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 LDLRAD3Q86YD5 345 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 NAGKQ9UJ70 344 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 UFC1Q9Y3C8 167 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 TRAV39A0A0B4J263 110 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 CEACAM18A8MTB9 384 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF205O95201 554 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 CTSSP25774 331 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 PPOXP50336 477 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF273Q14593 569 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 SPSB2Q99619 263 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms