RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 IGHV3-7P01780 117 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 SNRNP70P08621 437 aaKnown RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 SCTP09683 121 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 GSTT2P0CG29 244 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 GSTT2BP0CG30 244 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 SAA2P0DJI9 122 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 CD1BP29016 333 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 LSAMPQ13449 338 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 EBI3Q14213 229 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 FAM53AQ6NSI3 398 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 CNIH2Q6PI25 160 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 C11orf88Q6PI97 169 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 C12orf54Q6X4T0 127 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 LCNL1Q6ZST4 164 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 HOGA1Q86XE5 327 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 ODF3L1Q8IXM7 274 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 H1FOOQ8IZA3 346 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 DRAM1Q8N682 238 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 OR56B4Q8NH76 319 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 C15orf40Q8WUR7 153 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 CAPSLQ8WWF8 208 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 MAFIPQ8WZ33 124 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 GCDHQ92947 438 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 GINS4Q9BRT9 223 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 SLC25A33Q9BSK2 321 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 MRPL20Q9BYC9 149 aaKnown RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 C11orf54Q9H0W9 315 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 BEX1Q9HBH7 125 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 IFT46Q9NQC8 304 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 RDH8Q9NYR8 311 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 RSL24D1Q9UHA3 163 aaKnown RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 ELF5Q9UKW6 265 aaPredicted RBP3.18□□□□□ -1.9
CNOT4-202ENST00000356162 GAB2Q9UQC2 676 aa3.18□□□□□ -1.9
CNOT4-202ENST00000356162 IGKV1D-8A0A087WSZ0 117 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 SMIM31A0A1B0GVY4 71 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 CLPSL1A2RUU4 121 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NPIPB6E9PJ23 425 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 RAB29O14966 203 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 BET1O15155 118 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 FGF16O43320 207 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 FAM106CPP0CH98 169 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 TMEM11P17152 192 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NAT1P18440 290 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ELK1P19419 428 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 PAX6P26367 422 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 RCVRNP35243 200 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 CEACAM6P40199 344 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF134P52741 427 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ARPC4P59998 168 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ODF1Q14990 250 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MSMO1Q15800 293 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 Q6ZSV7 163 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 C5orf24Q7Z6I8 188 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MOB3BQ86TA1 216 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 TMEM219Q86XT9 240 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 Q8N2B8 174 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 Q8N6K4 173 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 BEST4Q8NFU0 473 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 OR10J5Q8NHC4 309 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 RBM14Q96PK6 669 aaKnown RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 S1PR3Q99500 378 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NABP2Q9BQ15 211 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NXF2Q9GZY0 626 aaKnown RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 PARP12Q9H0J9 701 aaKnown RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF702PQ9H963 129 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF230Q9UIE0 474 aaPredicted RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ANXA10Q9UJ72 324 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF221Q9UK13 617 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 CCDC160A6NGH7 325 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 OR5H14A6NHG9 310 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 RBBP9O75884 186 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 SLC22A5O76082 557 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MOSP00540 346 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 IGKV1D-33P01593 117 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 IGKV1-33P01594 117 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 PRSS3P35030 304 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 GPR12P47775 334 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 REG1BP48304 166 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 TAS2R46P59540 309 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MRPS10P82664 201 aaKnown RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 DIAPH2-AS1Q14236 149 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 CDK10Q15131 360 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ACTBL2Q562R1 376 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 IGSF11Q5DX21 431 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 CCBE1Q6UXH8 406 aaPredicted RBP3.17□□□□□ -1.9
CNOT4-202ENST00000356162 OR8H1Q8NGG4 311 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 OR2T10Q8NGZ9 312 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 GPX8Q8TED1 209 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 SNAPC3Q92966 411 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF251Q9BRH9 671 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 ST6GALNAC5Q9BVH7 336 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 PRSS22Q9GZN4 317 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 OR2D2Q9H210 308 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 MIXL1Q9H2W2 232 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NECAP2Q9NVZ3 263 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 NDUFA13Q9P0J0 144 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 EXTL2Q9UBQ6 330 aa3.17□□□□□ -1.9
CNOT4-202ENST00000356162 A3GALT2U3KPV4 340 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms