RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 HES7Q9BYE0 225 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 FKBP11Q9NYL4 201 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 DCHS1Q96JQ0 3298 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 GJE1A6NN92 205 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 RPL30P62888 115 aaKnown RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 SPSB4Q96A44 273 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 NOL4LQ96MY1 436 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 PYGO2Q9BRQ0 406 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 OR6C3Q9NZP0 311 aa8.56□□□□□ -1.04
PTPRA-203ENST00000356147 POLR3KQ9Y2Y1 108 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-203ENST00000356147 C11orf94C9JXX5 98 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 TGOLN2O43493 480 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 NDUFB4O95168 129 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 CNN1P51911 297 aaKnown RBP8.55□□□□□ -1.04
PTPRA-203ENST00000356147 CXorf67Q86X51 503 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-203ENST00000356147 TPRX1Q8N7U7 411 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 AGBL5Q8NDL9 886 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 PRDM14Q9GZV8 571 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 PATZ1Q9HBE1 687 aaKnown RBP8.55□□□□□ -1.04
PTPRA-203ENST00000356147 TRAPPC1Q9Y5R8 145 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 FRMD6-AS1P0C7T7 363 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 COX5BP10606 129 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 EDDM3BP56851 147 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 Q0VFX4 171 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 LTC4SQ16873 150 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 ACTL10Q5JWF8 245 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 Q6ZS49 121 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 TBX15Q96SF7 602 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF391Q9UJN7 358 aa8.55□□□□□ -1.04
PTPRA-203ENST00000356147 GCGP01275 180 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 IGHV3-7P01780 117 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 SRD5A2P31213 254 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 RNPS1Q15287 305 aaKnown RBP8.54□□□□□ -1.04
PTPRA-203ENST00000356147 RAB30Q15771 203 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 OR5A2Q8NGI9 324 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 PINX1Q96BK5 328 aaKnown RBP8.54□□□□□ -1.04
PTPRA-203ENST00000356147 IGHV3-43A0A0B4J1X8 118 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 FAM166BA8MTA8 275 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 DEFB108AA8MXU0 73 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 S1PR2O95136 353 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 IGHV3-43DP0DP04 118 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 EPHA8P29322 1005 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-203ENST00000356147 COLCA1Q6ZS62 124 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 Q8NFD4 153 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 MS4A10Q96PG2 267 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 OR2D2Q9H210 308 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 HIPK2Q9H2X6 1198 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 SH2D2AQ9NP31 389 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 ODAMA1E959 279 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 TOX3O15405 576 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-203ENST00000356147 SPINK4O60575 86 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 GNB1P62873 340 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 DBX2Q6ZNG2 339 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 GBGT1Q8N5D6 347 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 OR52L2PQ8NGH6 319 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
PTPRA-203ENST00000356147 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 LOC102723996A0A087X1L8 192 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 ANKRD30BLA7E2S9 258 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 F2Z2F3 143 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 CDIPTO14735 213 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 RBFOX2O43251 390 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPRA-203ENST00000356147 OR2H2O95918 312 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 GRPP07492 148 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 HOXA6P31267 233 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 DNLZQ5SXM8 178 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 TOMM20LQ6UXN7 152 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 SGMS2Q8NHU3 365 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 IFI44Q8TCB0 444 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 LSM10Q969L4 123 aaKnown RBP8.53□□□□□ -1.04
PTPRA-203ENST00000356147 NEIL1Q96FI4 390 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-203ENST00000356147 ZDBF2Q9HCK1 2354 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 MANBALQ9NQG1 85 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A10PA6NDY2 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A18PA6NE21 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A16PA6NEW6 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A20PA6NIJ5 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A8PA6NJQ4 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A7PA6NKC0 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A22PA8MWA6 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A12PA8MX19 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A5PA8MXJ8 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A23PA8MXZ1 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 CFIP05156 583 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A15PP0C7V4 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A13PP0C7W8 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A14PP0C7W9 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 FAM90A24PP0C7X0 464 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 CBLN1P23435 193 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 OR3A1P47881 315 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 COA6Q5JTJ3 125 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms