RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 GCM2O75603 506 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-202ENST00000355133 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-202ENST00000355133 HLA-DQB1P01920 261 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 RND2P52198 227 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-202ENST00000355133 A0A1W2PS18 150 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 H3BVH4 76 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 MAS1LP35410 378 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 MFAP2P55001 183 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-202ENST00000355133 STPG2Q8N412 459 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 UNC119Q13432 240 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM252Q8N6L7 170 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 ARID1AO14497 2285 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 FAM74A7A6NL05 159 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
SCN8A-202ENST00000355133 KLF7O75840 302 aaPredicted RBP11.35□□□□□ -0.59
SCN8A-202ENST00000355133 NDUFB4O95168 129 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 BCL2P10415 239 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 SULT1A2P50226 295 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
SCN8A-202ENST00000355133 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 FAM206AQ9NX38 181 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 MEOX2P50222 304 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 CD81P60033 236 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
SCN8A-202ENST00000355133 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 OR1N2Q8NGR9 330 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 CCL19Q99731 98 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 WNT5BQ9H1J7 359 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF345Q14585 488 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 PGPA6NDG6 321 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 UBE2L6O14933 153 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 NDUFA2O43678 99 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 ZIC3O60481 467 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 BTF3P20290 206 aaKnown RBP11.35□□□□□ -0.59
SCN8A-202ENST00000355133 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 PKIBQ9C010 78 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 MIOXQ9UGB7 285 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 COL4A1P02462 1669 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
SCN8A-202ENST00000355133 OR2A4O95047 310 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ISG15P05161 165 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SUCLG1P53597 346 aaKnown RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 FDCSPQ8NFU4 85 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF502Q8TBZ5 544 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 HSPB7Q9UBY9 170 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 IGKV3-11P04433 115 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 GLIPR1P48060 266 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 FHL5Q5TD97 284 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SMIM12Q96EX1 92 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ALX4Q9H161 411 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ELF5Q9UKW6 265 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM56-RWDD3S4R434 201 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 IGHV1-69-2A0A0G2JMI3 117 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SERF2P84101 59 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SMIM10L1P0DMW3 83 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 PCSK4Q6UW60 755 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 DDB2Q92466 427 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 PPP1R3EQ9H7J1 279 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 CXCL2P19875 107 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 GCSHP23434 173 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 PNKDQ8N490 385 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-202ENST00000355133 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 DSPPQ9NZW4 1301 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 UBR3Q6ZT12 1888 aa11.34□□□□□ -0.59
SCN8A-202ENST00000355133 NINQ8N4C6 2090 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 A0A1W2PR77 199 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF324O75467 553 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-202ENST00000355133 MFAP4P55083 255 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 SPSB2Q99619 263 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 TIMP4Q99727 224 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN8A-202ENST00000355133 C1QL1O75973 258 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-202ENST00000355133 NPBWR2P48146 333 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 NMUP48645 174 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 C19orf54Q5BKX5 351 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms