RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SEBOXQ9HB31 216 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TREM2Q9NZC2 230 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 DOK5Q9P104 306 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 INTS1Q8N201 2190 aaKnown RBP16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TIMM8AO60220 97 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-201ENST00000354547 CTAG1AP78358 180 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 SSX3Q99909 188 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 ZNF251Q9BRH9 671 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 IGKV1D-33P01593 117 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 IGKV1-33P01594 117 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 HOXC12P31275 282 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 GABRA6Q16445 453 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 FIP1L1Q6UN15 594 aaKnown RBP16.42■□□□□ 0.22
COL13A1-201ENST00000354547 WIPI2Q9Y4P8 454 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 CACNA1GO43497 2377 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 M0R296 226 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 ZG16O60844 167 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 SPNS3Q6ZMD2 512 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 SLC35E3Q7Z769 313 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 ZNF645Q8N7E2 425 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 FAM234AQ9H0X4 552 aa16.42■□□□□ 0.22
COL13A1-201ENST00000354547 ODAMA1E959 279 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 PTBP3O95758 552 aaKnown RBP16.41■□□□□ 0.22
COL13A1-201ENST00000354547 RPP25LQ8N5L8 163 aaKnown RBP16.41■□□□□ 0.22
COL13A1-201ENST00000354547 ZNF610Q8N9Z0 462 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 DMXL1Q9Y485 3027 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 ST8SIA5O15466 376 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 ZNF737O75373 536 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 TNFSF10P50591 281 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 CLEC12BQ2HXU8 276 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 GFI1BQ5VTD9 330 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 FAM214BQ7L5A3 538 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 COQ2Q96H96 371 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 ZDHHC11Q9H8X9 412 aa16.41■□□□□ 0.22
COL13A1-201ENST00000354547 CISD1Q9NZ45 108 aaKnown RBP16.41■□□□□ 0.22
COL13A1-201ENST00000354547 RNF212BA8MTL3 300 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 IQCF6A8MYZ5 107 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 TMEM41BQ5BJD5 291 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 CA5BP1Q8WTZ4 195 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 GATAD1Q8WUU5 269 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 RPUSD4Q96CM3 377 aaKnown RBP16.4■□□□□ 0.22
COL13A1-201ENST00000354547 PSG11Q9UQ72 335 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 A0A087WWC5 75 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 TRAV1-1A0A0B4J248 108 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 PIGBOS1A0A0B4J2F0 54 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 BMP5P22003 454 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 Q3ZCU0 254 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 C11orf53Q8IXP5 236 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 NECAP1Q8NC96 275 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 TRBV23-1A0A0A0MS06 115 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 ADIRFQ15847 76 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 ACSM6Q6P461 480 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 FDCSPQ8NFU4 85 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 OR13A1Q8NGR1 328 aa16.4■□□□□ 0.22
COL13A1-201ENST00000354547 TRAV20A0A0B4J274 112 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 PPIHO43447 177 aaKnown RBP16.39■□□□□ 0.21
COL13A1-201ENST00000354547 MAS1LP35410 378 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 S100A12P80511 92 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 COL10A1Q03692 680 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 FOXF2Q12947 444 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 SSX9Q7RTT3 188 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 C1QL4Q86Z23 238 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 TCEAL7Q9BRU2 100 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 TOLLIPQ9H0E2 274 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BKO60814 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BJP06899 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BOP23527 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BBP33778 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BDP58876 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 BRWD1-AS2P59051 145 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BCP62807 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 SERF2P84101 59 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 TFF3Q07654 80 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST2H2BEQ16778 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.39■□□□□ 0.21
COL13A1-201ENST00000354547 PLA2G2CQ5R387 149 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 MBD3L1Q8WWY6 194 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BHQ93079 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BNQ99877 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 HIST1H2BMQ99879 126 aa16.39■□□□□ 0.21
COL13A1-201ENST00000354547 PSMG3Q9BT73 122 aaPredicted RBP16.39■□□□□ 0.21
COL13A1-201ENST00000354547 FGF7P21781 194 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 Q6ZT83 130 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 FAM210BQ96KR6 192 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 MGAQ8IWI9 3026 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-201ENST00000354547 LRRC30A6NM36 301 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 IFITM10A6NMD0 228 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 MSMO1Q15800 293 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 VAX2Q9UIW0 290 aa16.38■□□□□ 0.21
COL13A1-201ENST00000354547 OOEPA6NGQ2 149 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 LINC00473A8K010 186 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 WDR82Q6UXN9 313 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 ACP7Q6ZNF0 438 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 H2BFWTQ7Z2G1 175 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 C9orf106Q8NAJ2 232 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 OR5T1Q8NG75 326 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 DTD1Q8TEA8 209 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 SMIM7Q9BQ49 75 aa16.37■□□□□ 0.21
COL13A1-201ENST00000354547 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms