RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 OR2T10Q8NGZ9 312 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 MBD3L1Q8WWY6 194 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 CLDN34H7C241 214 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 NDUFB6O95139 128 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 SCTP09683 121 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 PGLYRP3Q96LB9 341 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 IL20Q9NYY1 176 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 LPAR3Q9UBY5 353 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 PRNDQ9UKY0 176 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 SAA1P0DJI8 122 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-201ENST00000353414 SIGIRRQ6IA17 410 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 MRGPRGQ86SM5 289 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 C1orf174Q8IYL3 243 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 WNT5BQ9H1J7 359 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 WNT9BO14905 357 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 PDLIM4P50479 330 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM95Q3KNT9 176 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 AWAT1Q58HT5 328 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM52Q8NDY8 209 aa8.66□□□□□ -1.02
COL11A1-201ENST00000353414 FOXI3A8MTJ6 420 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-201ENST00000353414 HYPMO75409 117 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 IL13RA2Q14627 380 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 KLK8O60259 260 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 GAGE10A6NGK3 116 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 PLPP2O43688 288 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM127O75204 238 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 KBTBD11O94819 623 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 CXorf1O96002 111 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 RIPPLY3P57055 190 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 CDC20Q12834 499 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 BSXQ3C1V8 233 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 C12orf73Q69YU5 71 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 ZPLD1Q8TCW7 415 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 GPR82Q96P67 336 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 IGHV1-45A0A0A0MS14 117 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
COL11A1-201ENST00000353414 RPL27AP46776 148 aaKnown RBP8.65□□□□□ -1.02
COL11A1-201ENST00000353414 SNAI3Q3KNW1 292 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 FAM201AQ5SY85 155 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
COL11A1-201ENST00000353414 NPIPB6E9PJ23 425 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 IGHV3-11P01762 117 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 SP9P0CG40 484 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 RND2P52198 227 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 LIMS2Q7Z4I7 341 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 SLC22A18ASQ8N1D0 253 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 GEMIN7Q9H840 131 aaKnown RBP8.65□□□□□ -1.03
COL11A1-201ENST00000353414 GZMHP20718 246 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 ANOS1P23352 680 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 RNASE4P34096 147 aaKnown RBP8.65□□□□□ -1.03
COL11A1-201ENST00000353414 RUNX1Q01196 453 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 INO80CQ6PI98 192 aaPredicted RBP8.65□□□□□ -1.03
COL11A1-201ENST00000353414 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 HSPB7Q9UBY9 170 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 MIOXQ9UGB7 285 aa8.65□□□□□ -1.03
COL11A1-201ENST00000353414 PGPA6NDG6 321 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 OR10J1P30954 320 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 EFNB2P52799 333 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 STARD6P59095 220 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 ST6GALNAC3Q8NDV1 305 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 SPOCK3Q9BQ16 436 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 COL11A1P12107 1806 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-201ENST00000353414 CENPVL1A0A0U1RR11 272 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 CD99P14209 185 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 CD24P25063 80 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 PEBP1P30086 187 aaKnown RBP8.64□□□□□ -1.03
COL11A1-201ENST00000353414 EWSR1Q01844 656 aaKnown RBP eCLIP8.64□□□□□ -1.03
COL11A1-201ENST00000353414 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 ABHD12Q8N2K0 398 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 LHFPL5Q8TAF8 219 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 ST6GAL2Q96JF0 529 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 OR2W1Q9Y3N9 320 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 TRGV3P03979 118 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 CDKN1AP38936 164 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 FAM106AQ4KMX7 169 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 FOXB2Q5VYV0 432 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-201ENST00000353414 CALYQ9NYX4 217 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 PXMP4Q9Y6I8 212 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 APC2O95996 2303 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 ISLRO14498 428 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 MFAP2P55001 183 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 PSG4Q00888 419 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 FOXJ2Q9P0K8 574 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 OR2H2O95918 312 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 PARD6GQ9BYG4 376 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-201ENST00000353414 KLHDC2Q9Y2U9 406 aa8.64□□□□□ -1.03
COL11A1-201ENST00000353414 LINC00869P0C866 280 aa8.63□□□□□ -1.03
COL11A1-201ENST00000353414 ERASQ7Z444 233 aa8.63□□□□□ -1.03
COL11A1-201ENST00000353414 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
COL11A1-201ENST00000353414 NUDT16L1Q9BRJ7 211 aaKnown RBP8.63□□□□□ -1.03
COL11A1-201ENST00000353414 Q9N2K0 584 aa8.63□□□□□ -1.03
COL11A1-201ENST00000353414 MTFP1Q9UDX5 166 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms