RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
PTPN11-201ENST00000351677 MIOXQ9UGB7 285 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 MTCL1Q9Y4B5 1905 aaKnown RBP13.75□□□□□ -0.21
PTPN11-201ENST00000351677 ZNF137PP52743 207 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 TMSB15BA0A087X1C1 80 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 SH2D7A6NKC9 451 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-201ENST00000351677 NAT2P11245 290 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 OR10J1P30954 320 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 Q6ZN92 141 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 RARRES2Q99969 163 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 PKIBQ9C010 78 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 NDUFB4O95168 129 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 SP9P0CG40 484 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 ZNF658BQ4V348 819 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-201ENST00000351677 PPP1R32Q7Z5V6 425 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 PAXXQ9BUH6 204 aa13.75□□□□□ -0.21
PTPN11-201ENST00000351677 CHCHD2Q9Y6H1 151 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-201ENST00000351677 SUCLG1P53597 346 aaKnown RBP13.74□□□□□ -0.21
PTPN11-201ENST00000351677 SLC35B1P78383 322 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 HILPDAQ9Y5L2 63 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
PTPN11-201ENST00000351677 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 GREB1Q4ZG55 1949 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 CBY3A6NI87 242 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 SMIM6P0DI80 62 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 C10orf128Q5T292 105 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 ELOBQ15370 118 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 C1orf174Q8IYL3 243 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 FGF11Q92914 225 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 RHOVQ96L33 236 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 TLNRD1Q9H1K6 362 aa13.74□□□□□ -0.21
PTPN11-201ENST00000351677 IGKV3D-11A0A0A0MRZ8 115 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 ZP1P60852 638 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 SLC2A8Q9NY64 477 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 ADAM11O75078 769 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 APCSP02743 223 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 NHLRC3Q5JS37 347 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 TAF15Q92804 592 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN11-201ENST00000351677 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-201ENST00000351677 ZNF716A6NP11 495 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 CEACAM18A8MTB9 384 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 SMPD2O60906 423 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 PRSS1P07477 247 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 ZNF273Q14593 569 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 TMEM187Q14656 261 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 PITPNC1Q9UKF7 332 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 ODAMA1E959 279 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 PLAUP00749 431 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 CELA3AP09093 270 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 C19orf48Q6RUI8 117 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 NPIPB13A6NJU9 1138 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 NPIPB4C9JG80 1138 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 RIGQ13278 110 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 PRNTQ86SH4 94 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 GCSAMQ8N6F7 178 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
PTPN11-201ENST00000351677 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 ZNF552Q9H707 407 aaPredicted RBP13.72□□□□□ -0.21
PTPN11-201ENST00000351677 GDF9O60383 454 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
PTPN11-201ENST00000351677 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 SIGLEC12Q96PQ1 595 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 SMDT1Q9H4I9 107 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 H0YL77 283 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 GLIPR1P48060 266 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 FHITP49789 147 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 NUDT16L1Q9BRJ7 211 aaKnown RBP13.72□□□□□ -0.21
PTPN11-201ENST00000351677 CHRNA10Q9GZZ6 450 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 ZG16O60844 167 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 TMEM208Q9BTX3 173 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 CALYQ9NYX4 217 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 OR2A4O95047 310 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 S1PR2O95136 353 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
PTPN11-201ENST00000351677 RPS11P62280 158 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPN11-201ENST00000351677 COX19Q49B96 90 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 KRTCAP3Q53RY4 240 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 SAXO1Q8IYX7 474 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 OR2A7Q96R45 310 aa13.72□□□□□ -0.21
PTPN11-201ENST00000351677 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
PTPN11-201ENST00000351677 OR5R1Q8NH85 324 aa13.71□□□□□ -0.21
PTPN11-201ENST00000351677 TP53RKQ96S44 253 aa13.71□□□□□ -0.21
PTPN11-201ENST00000351677 SCGB1C2P0DMR2 95 aa13.71□□□□□ -0.21
PTPN11-201ENST00000351677 LTBRP36941 435 aa13.71□□□□□ -0.21
PTPN11-201ENST00000351677 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.21
PTPN11-201ENST00000351677 RPL30P62888 115 aaKnown RBP13.71□□□□□ -0.21
PTPN11-201ENST00000351677 TRGC2P03986 189 aa13.71□□□□□ -0.21
PTPN11-201ENST00000351677 VKORC1L1Q8N0U8 176 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms