RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 FOXF1Q12946 379 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 OR10G3Q8NGC4 313 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 SFRP2Q96HF1 295 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
COG3-201ENST00000349995 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 CORTO00230 105 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 DHHO43323 396 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 ZNF735P0CB33 412 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 CEACAM6P40199 344 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
COG3-201ENST00000349995 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 SIGMAR1Q99720 223 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
COG3-201ENST00000349995 TCFL5Q9UL49 500 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 PLPP3O14495 311 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 B4GALT1P15291 398 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 MTURNQ8N3F0 131 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 VSTM2LQ96N03 204 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
COG3-201ENST00000349995 TMEM250H0YL14 139 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 GPR12P47775 334 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 WDR54Q9H977 334 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 K7N7A8 449 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 FOXS1O43638 330 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 ZNF141Q15928 474 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 RFESDQ8TAC1 157 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.32
COG3-201ENST00000349995 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.32
COG3-201ENST00000349995 OR4C46A6NHA9 309 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 ADMP35318 185 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 AKAP6Q13023 2319 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 PLGLAQ15195 96 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
COG3-201ENST00000349995 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
COG3-201ENST00000349995 UNC119Q13432 240 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 NOXO1Q8NFA2 376 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 ZNF519Q8TB69 540 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 TMEM56Q96MV1 263 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 COX7A2P2O60397 106 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 NPY1RP25929 384 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 CEACAM8P31997 349 aaPredicted RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 WFDC1Q9HC57 220 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 CDC42EP3Q9UKI2 254 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 CNIH1O95406 144 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 BTF3P20290 206 aaKnown RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 BCL3P20749 454 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 TMEM187Q14656 261 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 RTL8BQ17RB0 113 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 YRDCQ86U90 279 aaKnown RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 WNT16Q9UBV4 365 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 THSD7BQ9C0I4 1608 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 SLC25A5P05141 298 aaKnown RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 PATE4P0C8F1 98 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 OCIAD2Q56VL3 154 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
COG3-201ENST00000349995 HSD17B10Q99714 261 aaKnown RBP13.07□□□□□ -0.32
COG3-201ENST00000349995 GPR3P46089 330 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 CLDN15P56746 228 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 PILRAQ9UKJ1 303 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 LOC107984156A0A0G2JMH3 177 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 ARL17AQ8IVW1 177 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 ORAOV1Q8WV07 137 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 COL25A1Q9BXS0 654 aaPredicted RBP13.06□□□□□ -0.32
COG3-201ENST00000349995 A0A096LPE4 126 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 A0A1W2PPZ6 126 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 ODAMA1E959 279 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
COG3-201ENST00000349995 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 OXGR1Q96P68 337 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
COG3-201ENST00000349995 CST9LQ9H4G1 147 aa13.06□□□□□ -0.32
COG3-201ENST00000349995 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
COG3-201ENST00000349995 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 UBE2L3P68036 154 aaKnown RBP13.05□□□□□ -0.32
COG3-201ENST00000349995 TMEM186Q96B77 213 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 TMEM70Q9BUB7 260 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 A0A1B0GUS0 222 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 GAGE12BA1L429 117 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 DEFB108AA8MXU0 73 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 TM4SF19Q96DZ7 209 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 KCNS1Q96KK3 526 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 TMEM74BQ9NUR3 256 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 IBA57Q5T440 356 aaKnown RBP13.05□□□□□ -0.32
COG3-201ENST00000349995 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
COG3-201ENST00000349995 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 PMCHL2Q9BQD1 86 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 AICDAQ9GZX7 198 aa13.05□□□□□ -0.32
COG3-201ENST00000349995 SH2D2AQ9NP31 389 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms