RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 MAGT1Q9H0U3 335 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 DYSFO75923 2080 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.61
UBA3-201ENST00000349511 UTP20O75691 2785 aaKnown RBP11.21□□□□□ -0.62
UBA3-201ENST00000349511 A0A1W2PPE2 198 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 PRSS44E7EML9 344 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 UBE2CO00762 179 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 GPR37O15354 613 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 PSPNO60542 156 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 CCL20P78556 96 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 S100A12P80511 92 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 ZNF146Q15072 292 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 RHEBQ15382 184 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 GAPTQ8N292 157 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 GCSAMQ8N6F7 178 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 TMEM252Q8N6L7 170 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.62
UBA3-201ENST00000349511 SPIN2AQ99865 258 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 HES4Q9HCC6 221 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 GCM1Q9NP62 436 aa11.21□□□□□ -0.62
UBA3-201ENST00000349511 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.62
UBA3-201ENST00000349511 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 hCG_1809904A0A1W2PP81 198 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 A0A1W2PR64 198 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 A0A1W2PRV1 198 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 HSD17B6O14756 317 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 SH2D1BO14796 132 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 CLDN14O95500 239 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 NAPSAO96009 420 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 CYB5R3P00387 301 aaPredicted RBP11.2□□□□□ -0.62
UBA3-201ENST00000349511 TK1P04183 234 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 RAB5AP20339 215 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 VAMP2P63027 116 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 MZT1Q08AG7 82 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 HERPUD1Q15011 391 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBA3-201ENST00000349511 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
UBA3-201ENST00000349511 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 UBALD1Q8TB05 177 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 NANPQ8TBE9 248 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 PLPPR1Q8TBJ4 325 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 SLC25A31Q9H0C2 315 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
UBA3-201ENST00000349511 RNF115Q9Y4L5 304 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 PRR18Q8N4B5 295 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 CCL28Q9NRJ3 127 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 IL19Q9UHD0 177 aa11.2□□□□□ -0.62
UBA3-201ENST00000349511 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 DEFB108AA8MXU0 73 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.19□□□□□ -0.62
UBA3-201ENST00000349511 C19orf84I3L1E1 186 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 NXPH3O95157 252 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 GABRA2P47869 451 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 DYNLT3P51808 116 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 DEFB108BQ8NET1 73 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 OR5C1Q8NGR4 320 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBA3-201ENST00000349511 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
UBA3-201ENST00000349511 ARID1AO14497 2285 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 DSCAMO60469 2012 aa11.19□□□□□ -0.62
UBA3-201ENST00000349511 IGKV1-6A0A0C4DH72 117 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 CLEC18AA5D8T8 446 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 SRRM5B3KS81 715 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 TUSC2O75896 110 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 TNFSF4P23510 183 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 UCP1P25874 307 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 APOBEC3AP31941 199 aaPredicted RBP11.18□□□□□ -0.62
UBA3-201ENST00000349511 ID3Q02535 119 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 COL10A1Q03692 680 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 FABP9Q0Z7S8 132 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 SMIM21Q3B7S5 101 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 SOHLH1Q5JUK2 328 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 FIP1L1Q6UN15 594 aaKnown RBP11.18□□□□□ -0.62
UBA3-201ENST00000349511 SLC16A13Q7RTY0 426 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 CD177Q8N6Q3 437 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 CLEC18CQ8NCF0 446 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 MRPL30Q8TCC3 161 aaKnown RBP11.18□□□□□ -0.62
UBA3-201ENST00000349511 ABHD14BQ96IU4 210 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 DYNLRB1Q9NP97 96 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 PPP1R3CQ9UQK1 317 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 HSPA12AO43301 675 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 TNFSF12O43508 249 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 CST7O76096 145 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 TMEM50AO95807 157 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 S100A8P05109 93 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 PSG2P11465 335 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 EPHA1P21709 976 aa11.18□□□□□ -0.62
UBA3-201ENST00000349511 AESQ08117 197 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms