RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 SNHG12Q9BXW3 62 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
SRPK1-201ENST00000346162 MS4A18H0YCH9 400 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 KBTBD11O94819 623 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 FAM87AP0C7U9 286 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 MS4A18Q3C1V0 323 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 C1orf100Q5SVJ3 147 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 C1orf185Q5T7R7 199 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 TGIF2LYQ8IUE0 185 aa13.4□□□□□ -0.26
SRPK1-201ENST00000346162 H0YIZ8 118 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 A0A1W2PN81 502 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 C21orf140B9A014 251 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 SPRY3O43610 288 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 OTX1P32242 354 aaPredicted RBP13.39□□□□□ -0.27
SRPK1-201ENST00000346162 UCP3P55916 312 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 FAM27BQ5VT28 67 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 LPAR2Q9HBW0 351 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 CLEC3BP05452 202 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM50BP56557 158 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 ARL16Q0P5N6 197 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 AKIRIN1Q9H9L7 192 aaPredicted RBP13.39□□□□□ -0.27
SRPK1-201ENST00000346162 GZMBP10144 247 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 OR10V1Q8NGI7 309 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 NCOR1P1Q9H4R4 102 aa13.39□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 CXorf66Q5JRM2 361 aaPredicted RBP13.38□□□□□ -0.27
SRPK1-201ENST00000346162 DCAF10Q5QP82 559 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 GAPTQ8N292 157 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 LRRC75AQ8NAA5 344 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 ABHD14BQ96IU4 210 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 A0A1W2PP11 408 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 KLK10O43240 276 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 CBLN1P23435 193 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 PMELP40967 661 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 RTL8BQ17RB0 113 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 OR2T6Q8NHC8 308 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 HDHD3Q9BSH5 251 aaPredicted RBP13.38□□□□□ -0.27
SRPK1-201ENST00000346162 HIF1ANQ9NWT6 349 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 A0A1B0GU03 582 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 ZNF83P51522 516 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 OR8G5Q8NG78 346 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 OR10X1Q8NGY0 326 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 ZNF519Q8TB69 540 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 COMMD5Q9GZQ3 224 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 FZR1Q9UM11 496 aa13.38□□□□□ -0.27
SRPK1-201ENST00000346162 RTP5Q14D33 572 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 PIGYQ3MUY2 71 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 DNLZQ5SXM8 178 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 OR10S1Q8NGN2 331 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 GPR27Q9NS67 375 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM229AB2RXF0 380 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TSPAN7P41732 249 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 A0A1W2PQM1 296 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 A0A1W2PRS3 328 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 GDF9O60383 454 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 ISG15P05161 165 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
SRPK1-201ENST00000346162 CSN1S1P47710 185 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 NUBP1P53384 320 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 MFAP2P55001 183 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 MARS2Q96GW9 593 aaKnown RBP13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM204Q9BSN7 226 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 DERL1Q9BUN8 251 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 A0A0U1RQV5 110 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 LMX1BO60663 402 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 BMI1P35226 326 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TCTAP57738 103 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 LCN2P80188 198 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 SNAI3Q3KNW1 292 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 OR2M7Q8NG81 312 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 CHRNA10Q9GZZ6 450 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 HSPB7Q9UBY9 170 aa13.37□□□□□ -0.27
SRPK1-201ENST00000346162 TRGV10A0A0A0MS01 117 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 SOX8P57073 446 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 OR8B3Q8NGG8 313 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 RIF1Q5UIP0 2472 aaKnown RBP13.36□□□□□ -0.27
SRPK1-201ENST00000346162 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 CTSSP25774 331 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 SRIP30626 198 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 LGALS4P56470 323 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 HES1Q14469 280 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 SDF2L1Q9HCN8 221 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
SRPK1-201ENST00000346162 HS3ST3B1Q9Y662 390 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 HELTA6NFD8 242 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 M0R296 226 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 TNFSF13O75888 250 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 LTBRP36941 435 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 ZNF658BQ4V348 819 aaPredicted RBP13.36□□□□□ -0.27
SRPK1-201ENST00000346162 SLC25A47Q6Q0C1 308 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 RPRMQ9NS64 109 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 CNIH1O95406 144 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms