RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ASPMQ8IZT6 3477 aa15.03■□□□□ -0
VHL-202ENST00000345392 CTXND1A0A1B0GTU2 59 aa15.02■□□□□ -0
VHL-202ENST00000345392 DNPH1O43598 174 aa15.02■□□□□ -0
VHL-202ENST00000345392 BTF3P20290 206 aaKnown RBP15.02■□□□□ -0
VHL-202ENST00000345392 OTX2P32243 289 aa15.02■□□□□ -0
VHL-202ENST00000345392 TFF3Q07654 80 aa15.02■□□□□ -0
VHL-202ENST00000345392 FFAR4Q5NUL3 377 aa15.02■□□□□ -0
VHL-202ENST00000345392 CLN8Q9UBY8 286 aa15.02■□□□□ -0
VHL-202ENST00000345392 POLR3KQ9Y2Y1 108 aaPredicted RBP15.02■□□□□ -0
VHL-202ENST00000345392 CRYAAP02489 173 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 COX5BP10606 129 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 IL3RAP26951 378 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 SRD5A2P31213 254 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 ERVFC1-1P60608 527 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 TMEM14EPQ6UXP3 125 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 CISD2Q8N5K1 135 aaKnown RBP15.02□□□□□ -0.01
VHL-202ENST00000345392 USF3Q68DE3 2245 aa15.02□□□□□ -0.01
VHL-202ENST00000345392 A0A0U1RQK1 487 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 ZNF320A2RRD8 509 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 KRASP01116 189 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 CCKARP32238 428 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 BTNL3Q6UXE8 466 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 FAM58AQ8N1B3 248 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 AGBL5Q8NDL9 886 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 SIT1Q9Y3P8 196 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 CACNA1DQ01668 2161 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 PGPEP1LA6NFU8 196 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 M0R143 59 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 MLF1P58340 268 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 CST9LP1Q5W188 147 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 WDR54Q9H977 334 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 TRAPPC1Q9Y5R8 145 aa15.01□□□□□ -0.01
VHL-202ENST00000345392 DEGS1O15121 323 aa15□□□□□ -0.01
VHL-202ENST00000345392 RAMP3O60896 148 aa15□□□□□ -0.01
VHL-202ENST00000345392 P04436 131 aa15□□□□□ -0.01
VHL-202ENST00000345392 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
VHL-202ENST00000345392 RPL29P47914 159 aaKnown RBP15□□□□□ -0.01
VHL-202ENST00000345392 ZXDAP98168 799 aa15□□□□□ -0.01
VHL-202ENST00000345392 SRYQ05066 204 aa15□□□□□ -0.01
VHL-202ENST00000345392 OR5A2Q8NGI9 324 aa15□□□□□ -0.01
VHL-202ENST00000345392 KCNE4Q8WWG9 221 aa15□□□□□ -0.01
VHL-202ENST00000345392 PARD6GQ9BYG4 376 aaPredicted RBP15□□□□□ -0.01
VHL-202ENST00000345392 LIN7CQ9NUP9 197 aaKnown RBP15□□□□□ -0.01
VHL-202ENST00000345392 IGHV3-64DA0A0J9YX35 117 aa15□□□□□ -0.01
VHL-202ENST00000345392 C11orf94C9JXX5 98 aa15□□□□□ -0.01
VHL-202ENST00000345392 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15□□□□□ -0.01
VHL-202ENST00000345392 SIRPB1O00241 398 aa15□□□□□ -0.01
VHL-202ENST00000345392 MRPL33O75394 65 aaKnown RBP15□□□□□ -0.01
VHL-202ENST00000345392 GCH1P30793 250 aa15□□□□□ -0.01
VHL-202ENST00000345392 G6PCP35575 357 aa15□□□□□ -0.01
VHL-202ENST00000345392 SRP14P37108 136 aaKnown RBP15□□□□□ -0.01
VHL-202ENST00000345392 MPLP40238 635 aa15□□□□□ -0.01
VHL-202ENST00000345392 UBE2G2P60604 165 aa15□□□□□ -0.01
VHL-202ENST00000345392 Q0VFX4 171 aa15□□□□□ -0.01
VHL-202ENST00000345392 SPINK9Q5DT21 86 aa15□□□□□ -0.01
VHL-202ENST00000345392 DRAM1Q8N682 238 aa15□□□□□ -0.01
VHL-202ENST00000345392 NEIL1Q96FI4 390 aaPredicted RBP15□□□□□ -0.01
VHL-202ENST00000345392 DERL1Q9BUN8 251 aa15□□□□□ -0.01
VHL-202ENST00000345392 DEPPQ9NTK1 212 aa15□□□□□ -0.01
VHL-202ENST00000345392 TRAPPC2LQ9UL33 140 aa15□□□□□ -0.01
VHL-202ENST00000345392 TRBV6-6A0A0A6YYG2 114 aa15□□□□□ -0.01
VHL-202ENST00000345392 PINLYPA6NC86 204 aa15□□□□□ -0.01
VHL-202ENST00000345392 TYMSP04818 313 aa15□□□□□ -0.01
VHL-202ENST00000345392 KCNIP4Q6PIL6 250 aa15□□□□□ -0.01
VHL-202ENST00000345392 OR1L1Q8NH94 360 aa15□□□□□ -0.01
VHL-202ENST00000345392 TIMM9Q9Y5J7 89 aa15□□□□□ -0.01
VHL-202ENST00000345392 MED12LQ86YW9 2145 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 PIGBOS1A0A0B4J2F0 54 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 ZNF705FA8MVS1 300 aaPredicted RBP14.99□□□□□ -0.01
VHL-202ENST00000345392 ZNF705DP0CH99 300 aaPredicted RBP14.99□□□□□ -0.01
VHL-202ENST00000345392 ZNF705BP0CI00 300 aaPredicted RBP14.99□□□□□ -0.01
VHL-202ENST00000345392 TDGF1P3P51864 188 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 C1orf194Q5T5A4 169 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 FAM53AQ6NSI3 398 aaPredicted RBP14.99□□□□□ -0.01
VHL-202ENST00000345392 TCF23Q7RTU1 214 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 UBALD2Q8IYN6 164 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 ZDHHC16Q969W1 377 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 STRADBQ9C0K7 418 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 MANBALQ9NQG1 85 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 NAGKQ9UJ70 344 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 ZNF816Q0VGE8 651 aaPredicted RBP14.99□□□□□ -0.01
VHL-202ENST00000345392 OR2Y1Q8NGV0 311 aa14.99□□□□□ -0.01
VHL-202ENST00000345392 DNAJC13O75165 2243 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 C1QTNF9P0C862 333 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 RPL15P61313 204 aaKnown RBP14.98□□□□□ -0.01
VHL-202ENST00000345392 ZNF705AQ6ZN79 300 aaPredicted RBP14.98□□□□□ -0.01
VHL-202ENST00000345392 APOBEC3DQ96AK3 386 aaPredicted RBP14.98□□□□□ -0.01
VHL-202ENST00000345392 SDSLQ96GA7 329 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 MS4A10Q96PG2 267 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 ZG16O60844 167 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 COX5AP20674 150 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 IL11RAQ14626 422 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 LINC01551Q86U37 167 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 IL17BQ9UHF5 180 aa14.98□□□□□ -0.01
VHL-202ENST00000345392 A0A1B0GWJ7 208 aa14.97□□□□□ -0.01
VHL-202ENST00000345392 GRIFINA4D1Z8 144 aa14.97□□□□□ -0.01
VHL-202ENST00000345392 A6NNC1 897 aa14.97□□□□□ -0.01
VHL-202ENST00000345392 CA6P23280 308 aa14.97□□□□□ -0.01
VHL-202ENST00000345392 GDF1P27539 372 aa14.97□□□□□ -0.01
VHL-202ENST00000345392 FOLR3P41439 243 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms