RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CDK10Q15131 360 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 AWAT1Q58HT5 328 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 EAF1Q96JC9 268 aaPredicted RBP16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 EHFQ9NZC4 300 aa16.65■□□□□ 0.26
SMARCB1-202ENST00000344921 MOSP00540 346 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 PMP2P02689 132 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 HLA-DMAP28067 261 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 FCGR2CP31995 323 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 TNFSF8P32971 234 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 TAS2R46P59540 309 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 ARSJQ5FYB0 599 aaPredicted RBP16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 GLDNQ6ZMI3 551 aaPredicted RBP16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 OR5H2Q8NGV7 314 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 FCAMRQ8WWV6 532 aa16.64■□□□□ 0.25
SMARCB1-202ENST00000344921 NCBP2LA6PVI3 153 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 M0R1X1 148 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 TSPAN9O75954 239 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 NAT1P18440 290 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 RFX2P48378 723 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 PPP1R14BQ96C90 147 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 RBMXL1Q96E39 390 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 RANBP3Q9H6Z4 567 aaPredicted RBP16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 SDHAF2Q9NX18 166 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 ANAPC10Q9UM13 185 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 MOB4Q9Y3A3 225 aa16.63■□□□□ 0.25
SMARCB1-202ENST00000344921 A0A1B0GUS0 222 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 RBBP9O75884 186 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 RCVRNP35243 200 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 BLCAPP62952 87 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 EBI3Q14213 229 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 PYHIN1Q6K0P9 492 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 OR52I2Q8NH67 350 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 OR2T6Q8NHC8 308 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 LINC01006Q8NI28 216 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 PRSS22Q9GZN4 317 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 RABL2AQ9UBK7 228 aaPredicted RBP16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 KLK11Q9UBX7 282 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 RABL2BQ9UNT1 228 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 FABP12A6NFH5 140 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 H7C2Y5 167 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 M0QZK8 103 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 PROP1O75360 226 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 HRH1P35367 487 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 COMPP49747 757 aaPredicted RBP16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 ACTBP60709 375 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 ABCA11PQ4W5N1 156 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 FAM131AQ6UXB0 335 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 GAB2Q9UQC2 676 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 RNF114Q9Y508 228 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 A3GALT2U3KPV4 340 aa16.62■□□□□ 0.25
SMARCB1-202ENST00000344921 CLPSL1A2RUU4 121 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 OR5H14A6NHG9 310 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 AADACP22760 399 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 MC5RP33032 325 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 C9orf152Q5JTZ5 239 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 LYSMD2Q8IV50 215 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 ZNF645Q8N7E2 425 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 C3orf56Q8N813 242 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 SPATA3Q8NHX4 192 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 C16orf95Q9H693 158 aa16.61■□□□□ 0.25
SMARCB1-202ENST00000344921 IGKV1D-13A0A0B4J2D9 117 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 GABARAPH6UMI1 98 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 HAX1O00165 279 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 TUSC2O75896 110 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 PPYP01298 95 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 IGKV1-13P0DP09 117 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 LINC00205P59089 165 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 FXYD4P59646 89 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 MRPS10P82664 201 aaKnown RBP16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 OVCH2Q7RTZ1 564 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 SECTM1Q8WVN6 248 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 SIGLEC9Q9Y336 463 aa16.6■□□□□ 0.25
SMARCB1-202ENST00000344921 SLC22A5O76082 557 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 HERV-K104P61576 105 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 TSPAN5P62079 268 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 DGCR2P98153 550 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 DYRK1AQ13627 763 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 GIMAP1Q8WWP7 306 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 MTFP1Q9UDX5 166 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 WASHC3Q9Y3C0 194 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 MMP24Q9Y5R2 645 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 SH2D7A6NKC9 451 aaPredicted RBP16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 H0YJW9 148 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 APOA2P02652 100 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 Q8N6K4 173 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 ZNF2Q9BSG1 426 aaPredicted RBP16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 ZNF702PQ9H963 129 aa16.59■□□□□ 0.25
SMARCB1-202ENST00000344921 A0A1B0GVG6 124 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 PEX14O75381 377 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 MMDQ15546 238 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 C11orf88Q6PI97 169 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 Q6ZS46 218 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 TMEM17Q86X19 198 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 C5orf56Q8N8D9 126 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 ZNF383Q8NA42 475 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 OR5AN1Q8NGI8 311 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms