RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SYNGR2O43760 224 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 OR7C2O60412 319 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 GLI4P10075 376 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF17P17021 662 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CD33P20138 364 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CTSSP25774 331 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 OPRM1P35372 400 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ARG2P78540 354 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 POU3F1Q03052 451 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 MALLQ13021 153 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 RPEL1Q2QD12 228 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 Q6ZSR3 168 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 C1QL2Q7Z5L3 287 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 FAM58AQ8N1B3 248 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 DEFB125Q8N687 156 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 OR10G9Q8NGN4 311 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 OR10G7Q8NGN6 311 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SFXN3Q9BWM7 321 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF160Q9HCG1 818 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 STARD5Q9NSY2 213 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 IL36GQ9NZH8 169 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 TAAR3PQ9P1P4 343 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 NBEAQ8NFP9 2946 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SNRNP200O75643 2136 aaKnown RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 IGF2RP11717 2491 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SNURFLB1AK76 121 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 TM4SF5O14894 197 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 PDCD6O75340 191 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CEACAM5P06731 702 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CBLN1P23435 193 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 S100A7P31151 101 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 TIMP3P35625 211 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CLDN15P56746 228 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CLRN1P58418 232 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SLC38A11Q08AI6 406 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 MRPL49Q13405 166 aaKnown RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 LHFPL2Q6ZUX7 228 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 RPP25LQ8N5L8 163 aaKnown RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF721Q8TF20 911 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 NINJ1Q92982 152 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ADIPOR1Q96A54 375 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 UHRF2Q96PU4 802 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 TMEM147Q9BVK8 224 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SLC25A22Q9H936 323 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 ST20Q9HBF5 79 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 LHFPL6Q9Y693 200 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 CHD3Q12873 2000 aaKnown RBP6.93□□□□□ -1.3
ATG4A-201ENST00000343524 SPTBP11277 2137 aa6.93□□□□□ -1.3
ATG4A-201ENST00000343524 KIR2DS1A0A191URI9 304 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 UBE2L5PA0A1B0GUS4 154 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 CD300LBA8K4G0 201 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 H3BP45 60 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 HRKO00198 91 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 CD5LO43866 347 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 PAGE4O60829 102 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 IGHG1P01857 330 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 HLA-DQA1P01909 254 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 SMIM17P0DL12 118 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 PMCHP20382 165 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 DRD1P21728 446 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 KIR2DS4P43632 304 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 CDC34P49427 236 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-201ENST00000343524 OR1D5P58170 312 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 RPS18P62269 152 aaKnown RBP6.92□□□□□ -1.3
ATG4A-201ENST00000343524 HTD2P86397 168 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 KIR2DS1Q14954 304 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF324BQ6AW86 544 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-201ENST00000343524 TCF23Q7RTU1 214 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 SAXO1Q8IYX7 474 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 OR4F17Q8NGA8 305 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 FAM216AQ8WUB2 273 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 RAB1CQ92928 201 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 ELSPBP1Q96BH3 223 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 TMEM204Q9BSN7 226 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 MRPL13Q9BYD1 178 aaKnown RBP6.92□□□□□ -1.3
ATG4A-201ENST00000343524 MBNL1Q9NR56 388 aaKnown RBP6.92□□□□□ -1.3
ATG4A-201ENST00000343524 ALKBH4Q9NXW9 302 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 SMPXQ9UHP9 88 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 WNT6Q9Y6F9 365 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A10PA6NDY2 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A18PA6NE21 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A16PA6NEW6 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A20PA6NIJ5 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A8PA6NJQ4 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 LIPT2A6NK58 231 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A7PA6NKC0 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A22PA8MWA6 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 KIAA1324LA8MWY0 1029 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A12PA8MX19 464 aa6.91□□□□□ -1.3
ATG4A-201ENST00000343524 FAM90A5PA8MXJ8 464 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms