RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 ODAMA1E959 279 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 EIF3GO75821 320 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDK13-202ENST00000340829 MELTFP08582 738 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 ZNF273Q14593 569 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 SLC25A53Q5H9E4 307 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 SSX7Q7RTT5 188 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 RHOVQ96L33 236 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 CXorf1O96002 111 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 ZNF708P17019 499 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 FA2HQ7L5A8 372 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 CALHM1Q8IU99 346 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 OR5P3Q8WZ94 311 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 IL22RA2Q969J5 263 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 LINC00470Q9BZP3 86 aa16.56■□□□□ 0.24
CDK13-202ENST00000340829 KIF26BQ2KJY2 2108 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 PDE6DO43924 150 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 KRTCAP3Q53RY4 240 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 GLIPR1P48060 266 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 RNF24Q9Y225 148 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 S100A4P26447 101 aaKnown RBP16.55■□□□□ 0.24
CDK13-202ENST00000340829 TMEM45BQ96B21 275 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 ZNF714Q96N38 554 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 ASCL3Q9NQ33 180 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 HOXB1P14653 301 aaPredicted RBP16.55■□□□□ 0.24
CDK13-202ENST00000340829 FUT9Q9Y231 359 aa16.55■□□□□ 0.24
CDK13-202ENST00000340829 GNG7O60262 68 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 SRSF10O75494 262 aaKnown RBP16.54■□□□□ 0.24
CDK13-202ENST00000340829 FHITP49789 147 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 SNRPCP09234 159 aaKnown RBP16.54■□□□□ 0.24
CDK13-202ENST00000340829 C10orf113Q5VZT2 155 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 LEAP2Q969E1 77 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 UBTD1Q9HAC8 227 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 MDKP21741 143 aaPredicted RBP16.54■□□□□ 0.24
CDK13-202ENST00000340829 HELTA6NFD8 242 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 MSGN1A6NI15 193 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 WNT5AP41221 380 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 OR4C12Q96R67 309 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 TM2D1Q9BX74 207 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 COA4Q9NYJ1 87 aa16.54■□□□□ 0.24
CDK13-202ENST00000340829 IGHV3-72A0A0B4J1Y9 119 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 NPVFQ9HCQ7 196 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 CYB5R3P00387 301 aaPredicted RBP16.53■□□□□ 0.24
CDK13-202ENST00000340829 UCP3P55916 312 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 GFI1Q99684 422 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 PXMP4Q9Y6I8 212 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 RALGAPA1Q6GYQ0 2036 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 NAT2P11245 290 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 CRISP2P16562 243 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 FCER1GP30273 86 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 MMDQ15546 238 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 FAM122AQ96E09 287 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 KLHDC3Q9BQ90 382 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 CALYQ9NYX4 217 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 SPCS3P61009 180 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 KLHDC1Q8N7A1 406 aa16.53■□□□□ 0.24
CDK13-202ENST00000340829 TAF15Q92804 592 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDK13-202ENST00000340829 WNT9BO14905 357 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 MRPL54Q6P161 138 aaKnown RBP16.52■□□□□ 0.24
CDK13-202ENST00000340829 WDR73Q6P4I2 378 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 GCSAMQ8N6F7 178 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 RASL11BQ9BPW5 248 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 HEXA-AS1Q9H8Q6 139 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 RHBDL1O75783 438 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 S1PR2O95136 353 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 CTSSP25774 331 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 HTR1DP28221 377 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 FAM216AQ8WUB2 273 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 SMDT1Q9H4I9 107 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 SRD5A3Q9H8P0 318 aa16.52■□□□□ 0.24
CDK13-202ENST00000340829 PLXNA3P51805 1871 aa16.52■□□□□ 0.23
CDK13-202ENST00000340829 FOSL1P15407 271 aa16.52■□□□□ 0.23
CDK13-202ENST00000340829 AMTP48728 403 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 Q6ZT83 130 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 RARRES2Q99969 163 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 MPTX1A8MV57 137 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 ZG16O60844 167 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 HOXD4P09016 255 aaPredicted RBP16.51■□□□□ 0.23
CDK13-202ENST00000340829 HOXA6P31267 233 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 SSTR5P35346 364 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 C16orf82Q7Z2V1 217 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 ELOA3CA0A087WX78 387 aaPredicted RBP16.51■□□□□ 0.23
CDK13-202ENST00000340829 DRAM1Q8N682 238 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 MARCH11A6NNE9 402 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 M0QZ24 198 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 ZNF883P0CG24 379 aa16.51■□□□□ 0.23
CDK13-202ENST00000340829 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 TNFRSF9Q07011 255 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 VWA1Q6PCB0 445 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 LDLRAD3Q86YD5 345 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 RTBDNQ9BSG5 229 aaPredicted RBP16.5■□□□□ 0.23
CDK13-202ENST00000340829 TMUB1Q9BVT8 246 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 H0YL77 283 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 ZNF253O75346 499 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 OR2J3O76001 311 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 USF1P22415 310 aaPredicted RBP16.5■□□□□ 0.23
CDK13-202ENST00000340829 OR10J1P30954 320 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 BRS3P32247 399 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 TCTEX1D1Q8N7M0 179 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 PACRGQ96M98 296 aaPredicted RBP16.5■□□□□ 0.23
CDK13-202ENST00000340829 ZNF319Q9P2F9 582 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms