RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 RTBDNQ9BSG5 229 aaPredicted RBP12.01□□□□□ -0.49
CSRP1-201ENST00000340006 TRAV40A0A0B4J280 105 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 ITGB1BP1O14713 200 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 RAB29O14966 203 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 AKR1C4P17516 323 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 RRAS2P62070 204 aaPredicted RBP12.01□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF626Q68DY1 528 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 HCP5Q6MZN7 132 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 C8orf31Q8N9H6 132 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 ZFAND1Q8TCF1 268 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 PIPOXQ9P0Z9 390 aa12.01□□□□□ -0.49
CSRP1-201ENST00000340006 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
CSRP1-201ENST00000340006 HMX3A6NHT5 357 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 SNRPGP15A8MWD9 76 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 IL3RAP26951 378 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 HTR1DP28221 377 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 ABCA11PQ4W5N1 156 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
CSRP1-201ENST00000340006 LINC00311Q8N616 119 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 MED28Q9H204 178 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
CSRP1-201ENST00000340006 TLN2Q9Y4G6 2542 aa12□□□□□ -0.49
CSRP1-201ENST00000340006 A8MV72 311 aaPredicted RBP11.99□□□□□ -0.49
CSRP1-201ENST00000340006 SSNA1O43805 119 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 SLC22A5O76082 557 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 IGLV1-47P01700 117 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
CSRP1-201ENST00000340006 CTSDP07339 412 aaPredicted RBP11.99□□□□□ -0.49
CSRP1-201ENST00000340006 TRAPPC2P0DI81 140 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 TRAPPC2BP0DI82 140 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 FOSL1P15407 271 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 GNRHRP30968 328 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 UCP3P55916 312 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 TAS2R31P59538 309 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 PPP1R1AQ13522 171 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 NDUFA5Q16718 116 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 HLA-DRB5Q30154 266 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 BRD3OSQ6XYD6 125 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 AKAP14Q86UN6 197 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 LDLRAD3Q86YD5 345 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 SLC38A6Q8IZM9 456 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 TMEM230Q96A57 120 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 S1PR3Q99500 378 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 IGHV1-69DA0A0B4J2H0 117 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 LEUTXA8MZ59 168 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 NPFFO15130 113 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 LY6G6DO95868 133 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 IGHV1-69P01742 117 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 VAMP1P23763 118 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 S100GP29377 79 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 CEACAM3P40198 252 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 DHRS2Q13268 280 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF431Q8TF32 576 aaPredicted RBP11.99□□□□□ -0.49
CSRP1-201ENST00000340006 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 DPM3Q9P2X0 92 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 HILPDAQ9Y5L2 63 aa11.99□□□□□ -0.49
CSRP1-201ENST00000340006 SAA2-SAA4A0A096LPE2 208 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 TNFSF12O43508 249 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 SAA2P0DJI9 122 aaPredicted RBP11.98□□□□□ -0.49
CSRP1-201ENST00000340006 UBE2MP61081 183 aaKnown RBP11.98□□□□□ -0.49
CSRP1-201ENST00000340006 PHLDA2Q53GA4 152 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 RUSC1-AS1Q66K80 236 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 CLEC9AQ6UXN8 241 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF818PQ6ZRF7 136 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 SLC7A5P1Q8MH63 180 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 FAM216AQ8WUB2 273 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 C9orf170A2RU37 121 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 GPR31O00270 319 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 CCNKO75909 580 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 EPHA1P21709 976 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 REG1BP48304 166 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 DHODHQ02127 395 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 KRTAP1-1Q07627 177 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 FCN2Q15485 313 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 SSX2Q16385 188 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 ODF3L1Q8IXM7 274 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 DRAM1Q8N682 238 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 RPEQ96AT9 228 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 AKR1E2Q96JD6 320 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 RSRP1Q9BUV0 290 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 MS4A7Q9GZW8 240 aaPredicted RBP11.98□□□□□ -0.49
CSRP1-201ENST00000340006 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 PRELID1Q9Y255 219 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 FAM96BQ9Y3D0 163 aa11.98□□□□□ -0.49
CSRP1-201ENST00000340006 ODF3BA8MYP8 253 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 M0R1X1 148 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms