RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TRIP6Q15654 476 aaKnown RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 OR8B2Q96RD0 313 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 CCL28Q9NRJ3 127 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 TMEFF2Q9UIK5 374 aaPredicted RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 VSIG10L2P0DP72 767 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 OR8B12Q8NGG6 310 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 TNFRSF14Q92956 283 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 SMDT1Q9H4I9 107 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 LINC00614P0C842 121 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 PATE4P0C8F1 98 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 ACVR1Q04771 509 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 EIF3IQ13347 325 aaKnown RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 MRPL24Q96A35 216 aaKnown RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 RRHO14718 337 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 PAX2Q02962 417 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 PIGYQ3MUY2 71 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 MDP1Q86V88 176 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 BCL2L10Q9HD36 194 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 SSC4DQ8WTU2 575 aa11.24□□□□□ -0.61
USP47-202ENST00000339865 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
USP47-202ENST00000339865 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 SYNGR1O43759 233 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 SSPNQ14714 243 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CCL19Q99731 98 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 EGR1P18146 543 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 PCMT1P22061 227 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 PRICKLE4Q2TBC4 344 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 ELOVL5Q9NYP7 299 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 J3QW42 95 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 PSCAO43653 123 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CADM4Q8NFZ8 388 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 TRBV20OR9-2A0A075B6H5 130 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CD27P26842 260 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 FGF22Q9HCT0 170 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 RUNX1Q01196 453 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CENPVQ7Z7K6 275 aaPredicted RBP11.23□□□□□ -0.61
USP47-202ENST00000339865 CCL4L1Q8NHW4 92 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 MRAPQ8TCY5 172 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 VGLL1Q99990 258 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 TUBD1Q9UJT1 453 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CD3EP07766 207 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 MMDQ15546 238 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
USP47-202ENST00000339865 CNTFRP26992 372 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 PGPA6NDG6 321 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 KLF4O43474 513 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 SCAND1P57086 179 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 SERF2P84101 59 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 FIZ1Q96SL8 496 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 SEC11BP0C7V7 166 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 FAM53BQ14153 422 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 PKIBQ9C010 78 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 ASPDHA6ND91 283 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 NKG7Q16617 165 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 TINAGQ9UJW2 476 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 SLC52A3Q9NQ40 469 aa11.22□□□□□ -0.61
USP47-202ENST00000339865 CDIPTO14735 213 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.61
USP47-202ENST00000339865 ASB1Q9Y576 335 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 MYOM1P52179 1685 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 PPIAL4DF5H284 164 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 PTP4A1Q93096 173 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 PRR32B1ATL7 298 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 WNT9BO14905 357 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 LINC00869P0C866 280 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 OVCH2Q7RTZ1 564 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 ZNF714Q96N38 554 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 EML6Q6ZMW3 1958 aa11.21□□□□□ -0.61
USP47-202ENST00000339865 MED12LQ86YW9 2145 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 GPX1P07203 203 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 WDR54Q9H977 334 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 GFERP55789 205 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 TFF2Q03403 129 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.62
USP47-202ENST00000339865 TRGC1P0CF51 173 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 LTBRP36941 435 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 ASCL5Q7RTU5 278 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms